ID D3UC28_9NEOP Unreviewed; 257 AA.
AC D3UC28;
DT 20-APR-2010, integrated into UniProtKB/TrEMBL.
DT 20-APR-2010, sequence version 1.
DT 24-JAN-2024, entry version 33.
DE RecName: Full=DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00012418};
DE EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418};
DE Flags: Fragment;
GN Name=pol-II {ECO:0000313|EMBL:CAX52820.1};
OS Ecnomus continentalis.
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Trichoptera; Annulipalpia; Psychomyioidea;
OC Ecnomidae; Ecnomus.
OX NCBI_TaxID=623204 {ECO:0000313|EMBL:CAX52820.1};
RN [1] {ECO:0000313|EMBL:CAX52820.1}
RP NUCLEOTIDE SEQUENCE.
RA Johanson K.A., Espeland M.;
RT "Phylogeny of the Ecnomidae (Insecta: Trichoptera).";
RL Biol. J. Linn. Soc. Lond. 26:36-48(2010).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000256|ARBA:ARBA00024550};
CC -!- SIMILARITY: Belongs to the RNA polymerase beta' chain family.
CC {ECO:0000256|ARBA:ARBA00006460}.
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DR EMBL; FN178745; CAX52820.1; -; Genomic_DNA.
DR AlphaFoldDB; D3UC28; -.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR Gene3D; 1.10.132.30; -; 1.
DR Gene3D; 6.10.250.2940; -; 1.
DR Gene3D; 1.10.274.100; RNA polymerase Rpb1, domain 3; 1.
DR InterPro; IPR045867; DNA-dir_RpoC_beta_prime.
DR InterPro; IPR007066; RNA_pol_Rpb1_3.
DR InterPro; IPR042102; RNA_pol_Rpb1_3_sf.
DR InterPro; IPR007083; RNA_pol_Rpb1_4.
DR InterPro; IPR038120; Rpb1_funnel_sf.
DR PANTHER; PTHR19376; DNA-DIRECTED RNA POLYMERASE; 1.
DR PANTHER; PTHR19376:SF37; DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1; 1.
DR Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR SUPFAM; SSF64484; beta and beta-prime subunits of DNA dependent RNA-polymerase; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 1..105
FT /note="RNA polymerase Rpb1"
FT /evidence="ECO:0000259|Pfam:PF04983"
FT DOMAIN 132..236
FT /note="RNA polymerase Rpb1"
FT /evidence="ECO:0000259|Pfam:PF05000"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:CAX52820.1"
FT NON_TER 257
FT /evidence="ECO:0000313|EMBL:CAX52820.1"
SQ SEQUENCE 257 AA; 28413 MW; 29E19BFB85B47827 CRC64;
GKQIFSLIIP GNVNMIRTHS THPDEEDDGP YKWISPGDTK VMVEHGELIM GILCKRTLGT
SAGSLLHICM LELGHDTAGR FYGNIQTVVN NWLLLEGHSI GIGDTIADPQ TYTEIQKAIK
KAKEDVIEVI QKAHNMELEP TPGNTLRQTF ENQVNRILND ARDKTGGSAK KSLTEYNNLK
AMVVSGSKGS NINISQVIAC VGQQNVEGKR IPFGFRKRTL PHFIKDDYGP ESRGFVENSY
LAGLTPSEFY FHAMGGR
//
