ID D3Z263_MOUSE Unreviewed; 142 AA.
AC D3Z263;
DT 20-APR-2010, integrated into UniProtKB/TrEMBL.
DT 20-APR-2010, sequence version 1.
DT 24-JAN-2024, entry version 84.
DE RecName: Full=RNA 3'-terminal phosphate cyclase {ECO:0000256|ARBA:ARBA00021428};
DE Flags: Fragment;
GN Name=Rtca {ECO:0000313|Ensembl:ENSMUSP00000119463.2,
GN ECO:0000313|MGI:MGI:1913618};
GN Synonyms=Rtcd1 {ECO:0000313|MGI:MGI:1913618};
OS Mus musculus (Mouse).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Mus; Mus.
OX NCBI_TaxID=10090 {ECO:0000313|Ensembl:ENSMUSP00000119463.2, ECO:0000313|Proteomes:UP000000589};
RN [1] {ECO:0000313|Ensembl:ENSMUSP00000119463.2, ECO:0000313|Proteomes:UP000000589}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000119463.2,
RC ECO:0000313|Proteomes:UP000000589};
RX PubMed=19468303; DOI=10.1371/journal.pbio.1000112;
RA Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X.,
RA Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y.,
RA Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S.,
RA Teague B., Potamousis K., Churas C., Place M., Herschleb J., Runnheim R.,
RA Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., Lindblad-Toh K.,
RA Eichler E.E., Ponting C.P.;
RT "Lineage-specific biology revealed by a finished genome assembly of the
RT mouse.";
RL PLoS Biol. 7:E1000112-E1000112(2009).
RN [2] {ECO:0007829|PubMed:21183079}
RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX PubMed=21183079; DOI=10.1016/j.cell.2010.12.001;
RA Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R.,
RA Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.;
RT "A tissue-specific atlas of mouse protein phosphorylation and expression.";
RL Cell 143:1174-1189(2010).
RN [3] {ECO:0000313|Ensembl:ENSMUSP00000119463.2}
RP IDENTIFICATION.
RC STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000119463.2};
RG Ensembl;
RL Submitted (JUL-2023) to UniProtKB.
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DR AlphaFoldDB; D3Z263; -.
DR SMR; D3Z263; -.
DR jPOST; D3Z263; -.
DR MaxQB; D3Z263; -.
DR PeptideAtlas; D3Z263; -.
DR ProteomicsDB; 318264; -.
DR Antibodypedia; 33694; 168 antibodies from 26 providers.
DR Ensembl; ENSMUST00000153005.2; ENSMUSP00000119463.2; ENSMUSG00000000339.15.
DR AGR; MGI:1913618; -.
DR MGI; MGI:1913618; Rtca.
DR VEuPathDB; HostDB:ENSMUSG00000000339; -.
DR GeneTree; ENSGT00530000063404; -.
DR HOGENOM; CLU_1820250_0_0_1; -.
DR OMA; RRGHYPK; -.
DR ChiTaRS; Rtca; mouse.
DR Proteomes; UP000000589; Chromosome 3.
DR Bgee; ENSMUSG00000000339; Expressed in ear vesicle and 255 other cell types or tissues.
DR ExpressionAtlas; D3Z263; baseline and differential.
DR GO; GO:0003963; F:RNA-3'-phosphate cyclase activity; IEA:UniProtKB-EC.
DR GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR Gene3D; 3.65.10.20; RNA 3'-terminal phosphate cyclase domain; 1.
DR InterPro; IPR013791; RNA3'-term_phos_cycl_insert.
DR InterPro; IPR023797; RNA3'_phos_cyclase_dom.
DR InterPro; IPR037136; RNA3'_phos_cyclase_dom_sf.
DR InterPro; IPR000228; RNA3'_term_phos_cyc.
DR InterPro; IPR020719; RNA3'_term_phos_cycl-like_CS.
DR InterPro; IPR013792; RNA3'P_cycl/enolpyr_Trfase_a/b.
DR PANTHER; PTHR11096; RNA 3' TERMINAL PHOSPHATE CYCLASE; 1.
DR PANTHER; PTHR11096:SF0; RNA 3'-TERMINAL PHOSPHATE CYCLASE; 1.
DR Pfam; PF01137; RTC; 1.
DR Pfam; PF05189; RTC_insert; 1.
DR SUPFAM; SSF55205; EPT/RTPC-like; 1.
DR PROSITE; PS01287; RTC; 1.
PE 1: Evidence at protein level;
KW Proteomics identification {ECO:0007829|EPD:D3Z263,
KW ECO:0007829|MaxQB:D3Z263};
KW Reference proteome {ECO:0000313|Proteomes:UP000000589}.
FT DOMAIN 1..77
FT /note="RNA 3'-terminal phosphate cyclase"
FT /evidence="ECO:0000259|Pfam:PF01137"
FT DOMAIN 78..142
FT /note="RNA 3'-terminal phosphate cyclase insert"
FT /evidence="ECO:0000259|Pfam:PF05189"
FT NON_TER 142
FT /evidence="ECO:0000313|Ensembl:ENSMUSP00000119463.2"
SQ SEQUENCE 142 AA; 15514 MW; 7048EADDFA7826B7 CRC64;
MPCVLFAASP SELRLKGGTN AEMAPQIDYT MMVFKPIAEK FGFTFNCDIK TRGYYPKGGG
EVIVRVSPVK RLDPINLTDR GSVTKIYGRA FVAGVLPLKV AKDMAAAAVR CIRKEIRDLY
VSIQPVQEAR DQAFGNGSGI II
//