ID D4F2I4_EDWTA Unreviewed; 714 AA.
AC D4F2I4;
DT 18-MAY-2010, integrated into UniProtKB/TrEMBL.
DT 18-MAY-2010, sequence version 1.
DT 24-JAN-2024, entry version 37.
DE SubName: Full=Lysine decarboxylase, inducible {ECO:0000313|EMBL:EFE24011.1};
DE EC=4.1.1.18 {ECO:0000313|EMBL:EFE24011.1};
GN Name=cadA {ECO:0000313|EMBL:EFE24011.1};
GN ORFNames=EDWATA_00934 {ECO:0000313|EMBL:EFE24011.1};
OS Edwardsiella tarda ATCC 23685.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC Hafniaceae; Edwardsiella.
OX NCBI_TaxID=500638 {ECO:0000313|EMBL:EFE24011.1, ECO:0000313|Proteomes:UP000003692};
RN [1] {ECO:0000313|EMBL:EFE24011.1, ECO:0000313|Proteomes:UP000003692}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 23685 {ECO:0000313|EMBL:EFE24011.1,
RC ECO:0000313|Proteomes:UP000003692};
RA Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., Courtney L.,
RA Fronick C., Harrison M., Strong C., Farmer C., Delahaunty K., Markovic C.,
RA Hall O., Minx P., Tomlinson C., Mitreva M., Nelson J., Hou S., Wollam A.,
RA Pepin K.H., Johnson M., Bhonagiri V., Zhang X., Suruliraj S., Warren W.,
RA Chinwalla A., Mardis E.R., Wilson R.K.;
RL Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC Evidence={ECO:0000256|ARBA:ARBA00001933};
CC -!- SIMILARITY: Belongs to the Orn/Lys/Arg decarboxylase class-I family.
CC {ECO:0000256|ARBA:ARBA00010671}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EFE24011.1}.
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DR EMBL; ADGK01000038; EFE24011.1; -; Genomic_DNA.
DR RefSeq; WP_005282982.1; NZ_GG739633.1.
DR AlphaFoldDB; D4F2I4; -.
DR SMR; D4F2I4; -.
DR GeneID; 60779409; -.
DR HOGENOM; CLU_014292_3_0_6; -.
DR Proteomes; UP000003692; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:InterPro.
DR GO; GO:0008923; F:lysine decarboxylase activity; IEA:UniProtKB-EC.
DR GO; GO:0006520; P:amino acid metabolic process; IEA:InterPro.
DR CDD; cd00615; Orn_deC_like; 1.
DR Gene3D; 3.40.50.2300; -; 1.
DR Gene3D; 3.90.1150.10; Aspartate Aminotransferase, domain 1; 1.
DR Gene3D; 3.90.100.10; Orn/Lys/Arg decarboxylase, C-terminal domain; 1.
DR Gene3D; 3.40.640.10; Type I PLP-dependent aspartate aminotransferase-like (Major domain); 1.
DR InterPro; IPR005308; OKR_de-COase_N.
DR InterPro; IPR011193; Orn/lys/arg_de-COase.
DR InterPro; IPR000310; Orn/Lys/Arg_deCO2ase_major_dom.
DR InterPro; IPR008286; Prn/Lys/Arg_de-COase_C.
DR InterPro; IPR036633; Prn/Lys/Arg_de-COase_C_sf.
DR InterPro; IPR015424; PyrdxlP-dep_Trfase.
DR InterPro; IPR015421; PyrdxlP-dep_Trfase_major.
DR InterPro; IPR015422; PyrdxlP-dep_Trfase_small.
DR PANTHER; PTHR45229:SF3; BIODEGRADATIVE ARGININE DECARBOXYLASE; 1.
DR PANTHER; PTHR45229; CONSTITUTIVE ORNITHINE DECARBOXYLASE; 1.
DR Pfam; PF01276; OKR_DC_1; 1.
DR Pfam; PF03711; OKR_DC_1_C; 1.
DR Pfam; PF03709; OKR_DC_1_N; 1.
DR PIRSF; PIRSF009393; Orn_decarb; 1.
DR SUPFAM; SSF55904; Ornithine decarboxylase C-terminal domain; 1.
DR SUPFAM; SSF53383; PLP-dependent transferases; 1.
DR PROSITE; PS00703; OKR_DC_1; 1.
PE 3: Inferred from homology;
KW Lyase {ECO:0000313|EMBL:EFE24011.1};
KW Pyridoxal phosphate {ECO:0000256|PIRSR:PIRSR009393-1}.
FT DOMAIN 362..376
FT /note="Orn/Lys/Arg decarboxylases family 1 pyridoxal-P
FT attachment site"
FT /evidence="ECO:0000259|PROSITE:PS00703"
FT MOD_RES 367
FT /note="N6-(pyridoxal phosphate)lysine"
FT /evidence="ECO:0000256|PIRSR:PIRSR009393-1"
SQ SEQUENCE 714 AA; 81022 MW; 02114B31DEDD1D19 CRC64;
MNIIAILNHM GVYFKEEPIR ELHKALEAQN FQIVYPNDRE DLLKLIDNNA RLCGVIFDWD
TYNLDLCRDI SEMNEHLPVY AFANTHSTLD VSLSDLRLNV EFFEYALGAA EDIALKIRQS
TDAYVDEILP PLTKALFNYV KEGKYTFCTP GHMGGTAFQK SPVGSLFYDF YGANAMKSDI
SISVSELGSL LDHTGPHKEA EEYIARTFNA ERSYMVTNGT STANKIVGMY SAPAGSTIMI
DRNCHKSLTH LMMMSDVTPI YFRPTRNAYG ILGGIPKSEF ARETIEERVK NTPNATWPVH
AVVTNSTYDG LFYNAEYIKK TLDVKSIHFD SAWVPYTNFS PIYKGLCGMS GDRVEGKVIY
ETQSTHKLLA AFSQASMIHV KGDINEETFN EAFMMHTSTS PHYGIVASIE TAAAMMKGNA
GKRLINGSIE RAIRFRKEIK RLRSESDGWF FDVWQPEHID EAKCWNLDPK ESWHGFKDID
ENHMFLDPIK VTLLTPGMKE DGTMADTGIP ASIVAKYLDE HGIIVEKTGP YNLLFLFSIG
IDKTKAMSLL RGLTDFKRAY DLNLRVKNML PSLYREDPEF YENMRIQELA QGIHALIQHH
NLPDLMYRAF EVLPTMVMNP HNAFQMELRG QTEEVYLEEM IGKVNANMIL PYPPGVPLVM
PGEMLTEESR PVLEFLQMLC EIGAHYPGFE TDIHGAYRQA DGRYTVKVLK TEQK
//