ID D4IPW0_9BACT Unreviewed; 311 AA.
AC D4IPW0;
DT 18-MAY-2010, integrated into UniProtKB/TrEMBL.
DT 18-MAY-2010, sequence version 1.
DT 13-SEP-2023, entry version 56.
DE SubName: Full=Transcription termination factor {ECO:0000313|EMBL:CBK64972.1};
GN ORFNames=AL1_28430 {ECO:0000313|EMBL:CBK64972.1};
OS Alistipes shahii WAL 8301.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae;
OC Alistipes.
OX NCBI_TaxID=717959 {ECO:0000313|EMBL:CBK64972.1, ECO:0000313|Proteomes:UP000008794};
RN [1] {ECO:0000313|EMBL:CBK64972.1, ECO:0000313|Proteomes:UP000008794}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=WAL 8301 {ECO:0000313|EMBL:CBK64972.1,
RC ECO:0000313|Proteomes:UP000008794};
RG metaHIT consortium -- http://www.metahit.eu/;
RA Pajon A., Turner K., Parkhill J.;
RT "The genome sequence of Alistipes shahii WAL 8301.";
RL Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:CBK64972.1, ECO:0000313|Proteomes:UP000008794}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=WAL 8301 {ECO:0000313|EMBL:CBK64972.1,
RC ECO:0000313|Proteomes:UP000008794};
RA Pajon A.;
RL Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the NusB family.
CC {ECO:0000256|ARBA:ARBA00005952}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; FP929032; CBK64972.1; -; Genomic_DNA.
DR RefSeq; WP_015547776.1; NZ_CP102253.1.
DR AlphaFoldDB; D4IPW0; -.
DR STRING; 717959.AL1_28430; -.
DR GeneID; 66249043; -.
DR KEGG; ash:AL1_28430; -.
DR PATRIC; fig|717959.3.peg.1346; -.
DR HOGENOM; CLU_058797_0_0_10; -.
DR OrthoDB; 9787568at2; -.
DR BioCyc; ASHA717959:AL1_RS13385-MONOMER; -.
DR Proteomes; UP000008794; Chromosome.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006353; P:DNA-templated transcription termination; IEA:InterPro.
DR GO; GO:0031564; P:transcription antitermination; IEA:UniProtKB-KW.
DR Gene3D; 1.10.940.10; NusB-like; 1.
DR InterPro; IPR035926; NusB-like_sf.
DR InterPro; IPR011605; NusB_fam.
DR InterPro; IPR006027; NusB_RsmB_TIM44.
DR PANTHER; PTHR11078:SF3; ANTITERMINATION NUSB DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR11078; N UTILIZATION SUBSTANCE PROTEIN B-RELATED; 1.
DR Pfam; PF01029; NusB; 1.
DR SUPFAM; SSF48013; NusB-like; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008794};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription antitermination {ECO:0000256|ARBA:ARBA00022814};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 203..294
FT /note="NusB/RsmB/TIM44"
FT /evidence="ECO:0000259|Pfam:PF01029"
SQ SEQUENCE 311 AA; 35876 MW; 16621C8CA866079E CRC64;
MLSRRLLRIK VVKALFAHLK SGADNMMASE KTLMASVDKA YDLYFQILIL PVEIARYAEQ
RQELAKQKKL PTFEDLNPNT KFVDNAVIRT IANSDAVNDH VAARKLGWER YPELIRTLYA
QLTESDYYKD YMQREERSFD DDKKLLEDFF KELQSCEALD DVLEEMSILW TDDLPYIVIM
VLRTLSNLRV SHTELKVPAK FKSSEDPEFV KTLFEKSLVN YSAFQDYIEK FTANWDVERI
VFMDNLIIGT AMAELTSFPS VPVKVTLDEW IEISKYYSTP GSSTFINGVL DKIVESLTAE
GRIKKAGRGL I
//
