ID D4ZMH3_SHEVD Unreviewed; 1438 AA.
AC D4ZMH3;
DT 15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT 15-JUN-2010, sequence version 1.
DT 27-MAR-2024, entry version 70.
DE SubName: Full=Sensory box protein {ECO:0000313|EMBL:BAJ02872.1};
GN OrderedLocusNames=SVI_2901 {ECO:0000313|EMBL:BAJ02872.1};
OS Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Shewanellaceae; Shewanella.
OX NCBI_TaxID=637905 {ECO:0000313|EMBL:BAJ02872.1, ECO:0000313|Proteomes:UP000002350};
RN [1] {ECO:0000313|Proteomes:UP000002350}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JCM 10179 / CIP 106290 / LMG 19151 / DSS12
RC {ECO:0000313|Proteomes:UP000002350};
RX PubMed=20458400; DOI=10.1039/c000396d;
RA Aono E., Baba T., Ara T., Nishi T., Nakamichi T., Inamoto E., Toyonaga H.,
RA Hasegawa M., Takai Y., Okumura Y., Baba M., Tomita M., Kato C., Oshima T.,
RA Nakasone K., Mori H.;
RT "Complete genome sequence and comparative analysis of Shewanella violacea,
RT a psychrophilic and piezophilic bacterium from deep sea floor sediments.";
RL Mol. Biosyst. 6:1216-1226(2010).
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DR EMBL; AP011177; BAJ02872.1; -; Genomic_DNA.
DR STRING; 637905.SVI_2901; -.
DR KEGG; svo:SVI_2901; -.
DR eggNOG; COG5001; Bacteria.
DR HOGENOM; CLU_003758_3_0_6; -.
DR OrthoDB; 9804951at2; -.
DR Proteomes; UP000002350; Chromosome.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR Gene3D; 3.30.450.20; PAS domain; 2.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013655; PAS_fold_3.
DR InterPro; IPR011047; Quinoprotein_ADH-like_supfam.
DR InterPro; IPR011110; Reg_prop.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR011123; Y_Y_Y.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR33121; CYCLIC DI-GMP PHOSPHODIESTERASE PDEF; 1.
DR PANTHER; PTHR33121:SF71; CYCLIC DI-GMP PHOSPHODIESTERASE PDEF; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF08447; PAS_3; 1.
DR Pfam; PF13426; PAS_9; 1.
DR Pfam; PF07494; Reg_prop; 1.
DR Pfam; PF07495; Y_Y_Y; 1.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00086; PAC; 2.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF63829; Calcium-dependent phosphotriesterase; 1.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 2.
DR SUPFAM; SSF50998; Quinoprotein alcohol dehydrogenase-like; 1.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50113; PAC; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000002350};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..25
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 26..1438
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5003067879"
FT DOMAIN 829..882
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 949..1001
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 1029..1162
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 1171..1425
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
SQ SEQUENCE 1438 AA; 161856 MW; 53CCC162AB5DE1F9 CRC64;
MMPNTVMKTI STLLLALCLF GQAQAVEEKS EQSPTKQQTS FLLNSSTYNV PEGLSQSNIT
SIAEDNDNYV WIGTVNGLNK FDGKVFKHYY ANSNQGLPSS FIRSILFDKT NRLLVGTDNG
LAVYDKLKDK FFSITSKELG HSKRIWSLSE FKSGILIGTE NEVYITDFDL NVKRKYHGKF
NGVKQSVYFN GHIYLRTYSG KIFKITKNNK ITNIIENAND LKIINERLLV LTKDGIIDIS
KDNNKNININ DFSHITKNNS DIFAVKSNYI YKIDKDINNI LIGHFNSNGI TASPNIIYRG
KNSTYLTDQS LGLIVINDDN NLISSLDITR NNVWSISHVN SNVLIATDEK DLSLYGDDLN
LIMTYATEFY GPKSAVMINN DIFIATTEGV ISIDTESGKT ITIDNDSSFV LIKDLRSNSI
ISGTSSGYIL EYNFINKSLT KTKIDDGNPI FDIKVHEDSI FIATQGGLFQ LKDNIVSTLF
NSKYVVSLVG LNDYIYFGTG EGILRYDLSS NEISLIYNNK KPIFALSVNR NSIIATSIKE
VIIVDTETDE VTVLTDDFGS QDEYNAHSIL TLNDRTFLGG INGISYLSTR KIKDHIKNTP
LPIANLEALL IFNITENVDG KILTKQLSLT DNIKLKYSDY PFTLKFNTPG NTFDQINYVY
QMDGLSDAWV ESKGLNSATY TNLSPGEYNF TVYAIDPLTK NHGKHRIITI VITPPWWLSP
QAKFIYFMLS LIISGLIVKA ILRRREVQNQ IAKSEERLKL SLWGSGDEMW DWDIETGQIY
RSNIWGSLEF PRDGQRSGEA GEKSNIHPMD QERVSTALND HFDGKSDHFE AAYRVKGKSG
DWVWILDRAK IVERDEKDNP LRMTGTIKNI NNFKHAEEQL KLFERAIANI SEGMFILDSG
FKFVEVNEAC CELCLKPRDK FIGEQFNFDL YPDSYSAQIR TILNQQGRWS NDVESAKGDG
SSFLMELTVD AIYDELGQLS HYVGVFSDIS RRKQQEEELR KLTNNDLLTN LPNRSSLMVT
LGNLVKRDSH HTLMVLDLDN FKKINDSLGH QVGDELLIKV AGRIEAAVPY HTSIYRLGGD
EFAILVDDNP DIGSSAIIAN NVIEAFVTPF ELTLDKVVVG MSIGIVLYPE DDQNEQALLR
KADIAMYHAK SAGGNRYQFY SESLNRNAIR QLEVENLIRQ GIREDLFEVY YQAKINLKSG
KMAGMEALVR LNHPEHGLIP PNDFIPLAEE NGLIVEIGDI VLKKACFATQ KWRSQGIFNG
RVAVNLSSYQ FALPDLQQRI ESILRLTQLP AANLELEITE GTVIKEPEKA IKVMQQLSKM
GVSLALDDFG TGYSSLSYLK RFPIHTLKID KAFVDDIDKS DRDLKMVDSI ITIAHNMGLS
VVAEGVEDAS QLSILKALNC EDIQGFIFSK PVTEAEFTKL LNKEFIEPAL VQSDRKAI
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