ID D5SQQ6_PLAL2 Unreviewed; 360 AA.
AC D5SQQ6;
DT 13-JUL-2010, integrated into UniProtKB/TrEMBL.
DT 13-JUL-2010, sequence version 1.
DT 27-MAR-2024, entry version 71.
DE SubName: Full=LysR substrate-binding protein {ECO:0000313|EMBL:ADG68518.1};
GN OrderedLocusNames=Plim_2695 {ECO:0000313|EMBL:ADG68518.1};
OS Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 / Mu 290)
OS (Planctomyces limnophilus).
OC Bacteria; Planctomycetota; Planctomycetia; Planctomycetales;
OC Planctomycetaceae; Planctopirus.
OX NCBI_TaxID=521674 {ECO:0000313|EMBL:ADG68518.1, ECO:0000313|Proteomes:UP000002220};
RN [1] {ECO:0000313|EMBL:ADG68518.1, ECO:0000313|Proteomes:UP000002220}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43296 / DSM 3776 / IFAM 1008 / 290
RC {ECO:0000313|Proteomes:UP000002220};
RX PubMed=21304691; DOI=10.4056/sigs.1052813;
RA Labutti K., Sikorski J., Schneider S., Nolan M., Lucas S.,
RA Glavina Del Rio T., Tice H., Cheng J.F., Goodwin L., Pitluck S.,
RA Liolios K., Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A.,
RA Palaniappan K., Land M., Hauser L., Chang Y.J., Jeffries C.D.,
RA Tindall B.J., Rohde M., Goker M., Woyke T., Bristow J., Eisen J.A.,
RA Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P., Lapidus A.;
RT "Complete genome sequence of Planctomyces limnophilus type strain (Mu
RT 290).";
RL Stand. Genomic Sci. 3:47-56(2010).
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
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DR EMBL; CP001744; ADG68518.1; -; Genomic_DNA.
DR RefSeq; WP_013110949.1; NC_014148.1.
DR AlphaFoldDB; D5SQQ6; -.
DR STRING; 521674.Plim_2695; -.
DR KEGG; plm:Plim_2695; -.
DR eggNOG; COG0583; Bacteria.
DR HOGENOM; CLU_039613_6_1_0; -.
DR Proteomes; UP000002220; Chromosome.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd05466; PBP2_LTTR_substrate; 1.
DR Gene3D; 3.40.190.290; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30126; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR30126:SF40; HTH-TYPE TRANSCRIPTIONAL REGULATOR GLTR; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR PRINTS; PR00039; HTHLYSR.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000002220};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 2..59
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 360 AA; 39945 MW; E9675EAF06A832D1 CRC64;
MLELRAVEIF AEVANLRSFS KAARGLGISQ PVVSETVRAL EATLGEQLID RTKRPLELTP
AGKLVLDAGR DLLDRALRLE DSVRHLKNKV VGTVRIAAIY SVGLLQMGAY VRQFERLYPD
AALELRYLHP ETVVTSVTDE IADLGIVSFA SRRPDITCIP WQEQEIALIV YSGHRLANRT
KVRAREIDGE SLVTYTPQLQ VRTELDRWLK QARVNVEISH EFDNIENIKR AVEIGSGVAL
LPLPTVRREL EIGSLKAITL EDVRWVRPLG IIHKKNRQLT TAVRKFLDLL HQNPDSFLFG
NSMQTGHSMQ TATGIVPAVA VPNSSGRPLA GSSAILAQPE VLPIPDPPQE RIVVQSTIPP
//
