ID D5V2S6_ARCNC Unreviewed; 720 AA.
AC D5V2S6;
DT 13-JUL-2010, integrated into UniProtKB/TrEMBL.
DT 13-JUL-2010, sequence version 1.
DT 27-MAR-2024, entry version 65.
DE SubName: Full=Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ADG92508.1};
GN OrderedLocusNames=Arnit_0844 {ECO:0000313|EMBL:ADG92508.1};
OS Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / CCUG 15893 / LMG
OS 7604 / NCTC 12251 / CI) (Campylobacter nitrofigilis).
OC Bacteria; Campylobacterota; Epsilonproteobacteria; Campylobacterales;
OC Arcobacteraceae; Arcobacter.
OX NCBI_TaxID=572480 {ECO:0000313|EMBL:ADG92508.1, ECO:0000313|Proteomes:UP000000939};
RN [1] {ECO:0000313|EMBL:ADG92508.1, ECO:0000313|Proteomes:UP000000939}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 33309 / DSM 7299 / CCUG 15893 / LMG 7604 / NCTC 12251 / CI
RC {ECO:0000313|Proteomes:UP000000939};
RX PubMed=21304714; DOI=10.4056/sigs.912121;
RA Pati A., Gronow S., Lapidus A., Copeland A., Glavina Del Rio T., Nolan M.,
RA Lucas S., Tice H., Cheng J.F., Han C., Chertkov O., Bruce D., Tapia R.,
RA Goodwin L., Pitluck S., Liolios K., Ivanova N., Mavromatis K., Chen A.,
RA Palaniappan K., Land M., Hauser L., Chang Y.J., Jeffries C.D., Detter J.C.,
RA Rohde M., Goker M., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA Klenk H.P., Kyrpides N.C.;
RT "Complete genome sequence of Arcobacter nitrofigilis type strain (CI).";
RL Stand. Genomic Sci. 2:300-308(2010).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CP001999; ADG92508.1; -; Genomic_DNA.
DR AlphaFoldDB; D5V2S6; -.
DR STRING; 572480.Arnit_0844; -.
DR KEGG; ant:Arnit_0844; -.
DR eggNOG; COG2199; Bacteria.
DR eggNOG; COG2200; Bacteria.
DR eggNOG; COG3829; Bacteria.
DR HOGENOM; CLU_000445_70_50_7; -.
DR OrthoDB; 9790732at2; -.
DR Proteomes; UP000000939; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR Gene3D; 3.30.450.20; PAS domain; 2.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR33121; CYCLIC DI-GMP PHOSPHODIESTERASE PDEF; 1.
DR PANTHER; PTHR33121:SF78; CYCLIC DI-GMP PHOSPHODIESTERASE PDEI-RELATED; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF13426; PAS_9; 2.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00086; PAC; 1.
DR SMART; SM00091; PAS; 2.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 2.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50113; PAC; 1.
DR PROSITE; PS50112; PAS; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils}; Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000000939};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..31
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 219..270
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 270..325
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 348..485
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 485..720
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
FT COILED 453..491
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 720 AA; 83662 MW; 357E3F84B6208CD1 CRC64;
MFKVESKIKF SNNYDFNILL YLFCYICLIL IEEFKLDLKD IDYYDIIFKN TIDPILFLKD
GKFIDCNKAT LDILKIKSKK ELSNISPSQL SPLYQPDGRL SKEKEKEIIQ KCSKNGFIRF
EWLHIDLNKK EFWVEVTLRK STLKNEEIFI GSWRDISQIK EKEKNILKKN EELKKRYTQI
DKYNNVLKDI IDSDLTEALL HLEGYKKALD ESSIVSKTNT KGIITYVNNK FCEISGYEEK
ELLGKNHNII RNPANSKEFF KKMWGTLENK NIFRGVISNK KKDGSIYYVN STIIPVLDSN
NEIKEYIGIR NDVTSLFEKD EIITKQFTDN VTGLPNRQKL VEDSKNLLFP KLAMININYF
RDINDTYGID VGDFVLKEFS NKLSTLSDLN INIYRISGDL FGILAFGNYT TESLKILCLD
FLDEVKINPI KYDGHALNLS FSIGISSGRE WLLVEAEMAL QQAKAENKVL VMNLENKNND
ALKKKVELTN KIKYALKNDN LLIYGQKIIN NITGETKYEV LMRLKVDDKI LSPYFFLEHA
KKARLYHEMT RKMIKLACEY FKDKENSFSI NLTIQDITNE ETVEYLTNVL LETKTNKRII
LEIVESEQIN QFEKVTSFIK KMKHLGARIA IDDFGTGYSN FEYIIKLNVD ILKIDGSLIR
NIHKDKNIFI AVSTIVNFAK QLGLEIVAEF VDSQEVLETI KSLNIDCAQG YFLHEPEHLI
//
