GenomeNet

Database: UniProt
Entry: D6DAZ4_BIFLN
LinkDB: D6DAZ4_BIFLN
Original site: D6DAZ4_BIFLN 
ID   D6DAZ4_BIFLN            Unreviewed;       412 AA.
AC   D6DAZ4;
DT   13-JUL-2010, integrated into UniProtKB/TrEMBL.
DT   13-JUL-2010, sequence version 1.
DT   24-JAN-2024, entry version 70.
DE   RecName: Full=DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365};
GN   Name=recF {ECO:0000256|HAMAP-Rule:MF_00365};
GN   ORFNames=BIL_19520 {ECO:0000313|EMBL:CBK71347.1};
OS   Bifidobacterium longum subsp. longum F8.
OC   Bacteria; Actinomycetota; Actinomycetes; Bifidobacteriales;
OC   Bifidobacteriaceae; Bifidobacterium.
OX   NCBI_TaxID=722911 {ECO:0000313|EMBL:CBK71347.1, ECO:0000313|Proteomes:UP000007063};
RN   [1] {ECO:0000313|EMBL:CBK71347.1, ECO:0000313|Proteomes:UP000007063}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=F8 {ECO:0000313|EMBL:CBK71347.1,
RC   ECO:0000313|Proteomes:UP000007063};
RG   metaHIT consortium -- http://www.metahit.eu/;
RA   Pajon A., Turner K., Parkhill J., Duncan S., Flint H.;
RT   "The genome sequence of Bifidobacterium longum longum F8.";
RL   Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:CBK71347.1, ECO:0000313|Proteomes:UP000007063}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=F8 {ECO:0000313|EMBL:CBK71347.1,
RC   ECO:0000313|Proteomes:UP000007063};
RA   Pajon A.;
RL   Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: The RecF protein is involved in DNA metabolism; it is
CC       required for DNA replication and normal SOS inducibility. RecF binds
CC       preferentially to single-stranded, linear DNA. It also seems to bind
CC       ATP. {ECO:0000256|ARBA:ARBA00025401, ECO:0000256|HAMAP-Rule:MF_00365}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00365}.
CC   -!- SIMILARITY: Belongs to the RecF family. {ECO:0000256|HAMAP-
CC       Rule:MF_00365}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; FP929034; CBK71347.1; -; Genomic_DNA.
DR   RefSeq; WP_015512556.1; NC_021008.1.
DR   AlphaFoldDB; D6DAZ4; -.
DR   KEGG; blg:BIL_19520; -.
DR   PATRIC; fig|722911.3.peg.1493; -.
DR   HOGENOM; CLU_040267_1_1_11; -.
DR   Proteomes; UP000007063; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003697; F:single-stranded DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0006281; P:DNA repair; IEA:UniProtKB-UniRule.
DR   GO; GO:0006260; P:DNA replication; IEA:UniProtKB-UniRule.
DR   GO; GO:0009432; P:SOS response; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR   Gene3D; 1.20.1050.90; RecF/RecN/SMC, N-terminal domain; 1.
DR   HAMAP; MF_00365; RecF; 1.
DR   InterPro; IPR001238; DNA-binding_RecF.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR003395; RecF/RecN/SMC_N.
DR   InterPro; IPR042174; RecF_2.
DR   NCBIfam; TIGR00611; recf; 1.
DR   PANTHER; PTHR32182; DNA REPLICATION AND REPAIR PROTEIN RECF; 1.
DR   PANTHER; PTHR32182:SF0; DNA REPLICATION AND REPAIR PROTEIN RECF; 1.
DR   Pfam; PF02463; SMC_N; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE   3: Inferred from homology;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|HAMAP-
KW   Rule:MF_00365};
KW   Cytoplasm {ECO:0000256|ARBA:ARBA00022490, ECO:0000256|HAMAP-Rule:MF_00365};
KW   DNA damage {ECO:0000256|HAMAP-Rule:MF_00365};
KW   DNA repair {ECO:0000256|HAMAP-Rule:MF_00365};
KW   DNA replication {ECO:0000256|HAMAP-Rule:MF_00365};
KW   DNA-binding {ECO:0000256|HAMAP-Rule:MF_00365};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741, ECO:0000256|HAMAP-
KW   Rule:MF_00365}; SOS response {ECO:0000256|HAMAP-Rule:MF_00365}.
FT   DOMAIN          3..356
FT                   /note="RecF/RecN/SMC N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF02463"
FT   REGION          381..412
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        392..412
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   BINDING         30..37
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_00365"
SQ   SEQUENCE   412 AA;  44941 MW;  6B654692820C2C81 CRC64;
     MHISRLALDH YRSWSQVVVD FVPGVNILFG KNGLGKTNLV EAVEVLSTGS SHRTSSTLPL
     IERGQTTATI RANVADDAGQ TTTYEASIHA RGANRARINS GSSLYLRDII GKIPSVSFTP
     EDQRLVSGDP GARRTMMNQA AALLEPGYMQ TLQQFTRIAK QRATLLKQLN ANVNNGQPMD
     AVLSGLEIWT GQFIEAGVAL TRMRAHVIGL LAEPFAAIYA DLAGAGEQVT LTYAPSFDEV
     LMFDDPHPQI SEHFQRIYPG EVARGVNLIG PQRDDMNLEL AGIPAREFAS NGEMWTMALA
     LKMALFEIVR DRLGLQPIVI LDDVFAQLDD SRRTQILDFA RKQDQVLITV AAEGDVPDYE
     SAHRIDVAAL DEPASVILPT LGNLSNSREN ESLGGYDEKT AVDSASVERK VS
//
DBGET integrated database retrieval system