ID D6KH02_9FIRM Unreviewed; 432 AA.
AC D6KH02;
DT 13-JUL-2010, integrated into UniProtKB/TrEMBL.
DT 13-JUL-2010, sequence version 1.
DT 27-MAR-2024, entry version 49.
DE SubName: Full=DEAD-box ATP-dependent RNA helicase YdbR {ECO:0000313|EMBL:EFG23399.2};
GN ORFNames=HMPREF0873_00030 {ECO:0000313|EMBL:EFG23399.2};
OS Veillonella sp. 3_1_44.
OC Bacteria; Bacillota; Negativicutes; Veillonellales; Veillonellaceae;
OC Veillonella.
OX NCBI_TaxID=457416 {ECO:0000313|EMBL:EFG23399.2, ECO:0000313|Proteomes:UP000005761};
RN [1] {ECO:0000313|EMBL:EFG23399.2, ECO:0000313|Proteomes:UP000005761}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=3_1_44 {ECO:0000313|EMBL:EFG23399.2,
RC ECO:0000313|Proteomes:UP000005761};
RG The Broad Institute Genome Sequencing Platform;
RA Ward D., Earl A., Feldgarden M., Gevers D., Young S.K., Zeng Q.,
RA Koehrsen M., Alvarado L., Berlin A., Borenstein D., Chapman S., Chen Z.,
RA Engels R., Freedman E., Gellesch M., Goldberg J., Griggs A., Gujja S.,
RA Heilman E., Heiman D., Hepburn T., Howarth C., Jen D., Larson L., Mehta T.,
RA Park D., Pearson M., Richards J., Roberts A., Saif S., Shea T., Shenoy N.,
RA Sisk P., Stolte C., Sykes S., Walk T., White J., Yandava C., McDonald J.,
RA Ambrose C.E., Strauss J.C., Allen-Vercoe E., Haas B., Henn M.R.,
RA Nusbaum C., Birren B.;
RT "The Genome Sequence of Veillonella sp. 3_1_44.";
RL Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; GG770199; EFG23399.2; -; Genomic_DNA.
DR RefSeq; WP_008713607.1; NZ_GG770199.1.
DR AlphaFoldDB; D6KH02; -.
DR Proteomes; UP000005761; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
DR CDD; cd00268; DEADc; 1.
DR CDD; cd18787; SF2_C_DEAD; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR014014; RNA_helicase_DEAD_Q_motif.
DR PANTHER; PTHR47959:SF19; ATP-DEPENDENT RNA HELICASE DBPA; 1.
DR PANTHER; PTHR47959; ATP-DEPENDENT RNA HELICASE RHLE-RELATED; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS51195; Q_MOTIF; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000313|EMBL:EFG23399.2};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741}.
FT DOMAIN 2..30
FT /note="DEAD-box RNA helicase Q"
FT /evidence="ECO:0000259|PROSITE:PS51195"
FT DOMAIN 33..203
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 227..376
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 373..432
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 2..30
FT /note="Q motif"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00552"
FT COMPBIAS 373..402
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 432 AA; 48086 MW; 83AAA22D82984506 CRC64;
MKSFKSLGVC DELIIALQKQ GIKEPTPIQE QSIPVVFKGN DVIAKAQTGT GKTLAFLLPI
LQRVHTDVHQ EQVLIIAPTR ELIKQISDEA KELGSILNVD ILPLIGGKTI EAQLQQLGRR
PQVILGTPGR LLDHAKRGSL HLDCIRRVVL DEADQMLHMG FLPDIENLIG QTDANRQLLL
FSATIPDKIR NLAKAYMSKP ISVTAEGKHI TLESIDQRVY MMNPEEKTQR LIKMIEDDNP
FLAIVFCNKR EGAIRLSYEL TAAGLNIAEM HGDLTQGRRT QILRDFAKAK TQILVATDIA
ARGIDIEGIT HVYNYDVPRD VDYYIHRIGR TGRAGNSGIA VTFATPQDEA WLRRIERAIQ
ATLTKYTKDG QIKTKGNAST APKRTKSASK PKVTSTYQST KAKAHKARGH KGSNTRQRRA
STSQTGRRGK RR
//
