ID D7CLD4_SYNLT Unreviewed; 253 AA.
AC D7CLD4;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 59.
DE RecName: Full=Probable transcriptional regulatory protein Slip_0739 {ECO:0000256|HAMAP-Rule:MF_00693};
GN OrderedLocusNames=Slip_0739 {ECO:0000313|EMBL:ADI01519.1};
OS Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1).
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Syntrophomonadaceae;
OC Syntrophothermus.
OX NCBI_TaxID=643648 {ECO:0000313|EMBL:ADI01519.1, ECO:0000313|Proteomes:UP000000378};
RN [1] {ECO:0000313|Proteomes:UP000000378}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 12680 / TGB-C1 {ECO:0000313|Proteomes:UP000000378};
RX DOI=10.4056/sigs.1233249;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Djao O., Zhang X., Lucas S., Lapidus A., Glavina Del Rio T., Nolan M.,
RA Tice H., Cheng J., Han C., Tapia R., Goodwin L., Pitluck S., Liolios K.,
RA Ivanova N., Mavromatis K., Mikhailova N., Ovchinnikova G., Pati A.,
RA Brambilla E., Chen A., Palaniappan K., Land M., Hauser L., Chang Y.,
RA Jeffries C., Rohde M., Sikorski J., Spring S., Goker M., Detter J.,
RA Woyke T., Bristow J., Eisen J., Markowitz V., Hugenholtz P., Kyrpides N.,
RA Klenk H.;
RT "Complete genome sequence of Syntrophothermus lipocalidus type strain (TGB-
RT C1T).";
RL Stand. Genomic Sci. 3:267-275(2010).
RN [2] {ECO:0000313|EMBL:ADI01519.1, ECO:0000313|Proteomes:UP000000378}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 12680 / TGB-C1 {ECO:0000313|Proteomes:UP000000378};
RX PubMed=21304731;
RA Djao O.D., Zhang X., Lucas S., Lapidus A., Del Rio T.G., Nolan M., Tice H.,
RA Cheng J.F., Han C., Tapia R., Goodwin L., Pitluck S., Liolios K.,
RA Ivanova N., Mavromatis K., Mikhailova N., Ovchinnikova G., Pati A.,
RA Brambilla E., Chen A., Palaniappan K., Land M., Hauser L., Chang Y.J.,
RA Jeffries C.D., Rohde M., Sikorski J., Spring S., Goker M., Detter J.C.,
RA Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA Kyrpides N.C., Klenk H.P.;
RT "Complete genome sequence of Syntrophothermus lipocalidus type strain (TGB-
RT C1).";
RL Stand. Genomic Sci. 3:268-275(2010).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00693}.
CC -!- SIMILARITY: Belongs to the TACO1 family.
CC {ECO:0000256|ARBA:ARBA00008724, ECO:0000256|HAMAP-Rule:MF_00693}.
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DR EMBL; CP002048; ADI01519.1; -; Genomic_DNA.
DR RefSeq; WP_013174921.1; NC_014220.1.
DR AlphaFoldDB; D7CLD4; -.
DR STRING; 643648.Slip_0739; -.
DR KEGG; slp:Slip_0739; -.
DR eggNOG; COG0217; Bacteria.
DR HOGENOM; CLU_062974_2_2_9; -.
DR OrthoDB; 9781053at2; -.
DR Proteomes; UP000000378; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:UniProtKB-UniRule.
DR Gene3D; 1.10.10.200; -; 1.
DR Gene3D; 3.30.70.980; -; 2.
DR HAMAP; MF_00693; Transcrip_reg_TACO1; 1.
DR InterPro; IPR017856; Integrase-like_N.
DR InterPro; IPR048300; TACO1_YebC-like_2nd/3rd_dom.
DR InterPro; IPR049083; TACO1_YebC_N.
DR InterPro; IPR002876; Transcrip_reg_TACO1-like.
DR InterPro; IPR026564; Transcrip_reg_TACO1-like_dom3.
DR InterPro; IPR029072; YebC-like.
DR NCBIfam; TIGR01033; YebC/PmpR family DNA-binding transcriptional regulator; 1.
DR PANTHER; PTHR12532:SF6; TRANSCRIPTIONAL REGULATORY PROTEIN YEBC-RELATED; 1.
DR PANTHER; PTHR12532; UNCHARACTERIZED; 1.
DR Pfam; PF20772; TACO1_YebC_N; 1.
DR Pfam; PF01709; Transcrip_reg; 1.
DR SUPFAM; SSF75625; YebC-like; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490, ECO:0000256|HAMAP-Rule:MF_00693};
KW DNA-binding {ECO:0000256|HAMAP-Rule:MF_00693};
KW Reference proteome {ECO:0000313|Proteomes:UP000000378};
KW Transcription {ECO:0000256|ARBA:ARBA00023163, ECO:0000256|HAMAP-
KW Rule:MF_00693};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015, ECO:0000256|HAMAP-
KW Rule:MF_00693}.
FT DOMAIN 5..76
FT /note="TACO1/YebC-like N-terminal"
FT /evidence="ECO:0000259|Pfam:PF20772"
FT DOMAIN 83..240
FT /note="TACO1/YebC-like second and third"
FT /evidence="ECO:0000259|Pfam:PF01709"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 253 AA; 27841 MW; 6E82BA814048BC97 CRC64;
MSGHSKWANI KHKKARSDEK KGKVFTKIAK EIIIAARDGG GDPDNNPRLK ALIQKAKGVN
MPNENILRAI KRGTGEIEGG NIEEVTYEGY GPGGVALMLS IVTDNRNRTA ADIRHLFSKH
GGNLGEAGCV SWMFRKKGLL TLNSEDIGMD ADEFMLIAIE AGAEDVREDS GVLEVITSPE
DFSTVKEQLE NYGIRFDSAQ VAMVPETIVD VNDLETAKKV LKLVDILEDH DDVQEVYANF
SIPDDIMEKV QLQ
//
