ID   D7KB47_ARALL            Unreviewed;       611 AA.
AC   D7KB47;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   27-MAR-2024, entry version 55.
DE   SubName: Full=Pentatricopeptide repeat-containing protein {ECO:0000313|EMBL:EFH68243.1};
GN   ORFNames=ARALYDRAFT_314930 {ECO:0000313|EMBL:EFH68243.1};
OS   Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN   [1] {ECO:0000313|Proteomes:UP000008694}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX   PubMed=21478890; DOI=10.1038/ng.807;
RA   Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA   Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA   Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA   Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA   Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA   Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT   "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT   change.";
RL   Nat. Genet. 43:476-481(2011).
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DR   EMBL; GL348713; EFH68243.1; -; Genomic_DNA.
DR   RefSeq; XP_002891984.1; XM_002891938.1.
DR   AlphaFoldDB; D7KB47; -.
DR   STRING; 81972.D7KB47; -.
DR   EnsemblPlants; fgenesh1_pm.C_scaffold_1003710; fgenesh1_pm.C_scaffold_1003710; fgenesh1_pm.C_scaffold_1003710.
DR   GeneID; 9328046; -.
DR   Gramene; fgenesh1_pm.C_scaffold_1003710; fgenesh1_pm.C_scaffold_1003710; fgenesh1_pm.C_scaffold_1003710.
DR   KEGG; aly:9328046; -.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_0_1_1; -.
DR   OrthoDB; 470699at2759; -.
DR   Proteomes; UP000008694; Unassembled WGS sequence.
DR   GO; GO:0005739; C:mitochondrion; IEA:EnsemblPlants.
DR   GO; GO:0050832; P:defense response to fungus; IEA:EnsemblPlants.
DR   GO; GO:0009737; P:response to abscisic acid; IEA:EnsemblPlants.
DR   GO; GO:0009749; P:response to glucose; IEA:EnsemblPlants.
DR   GO; GO:0009651; P:response to salt stress; IEA:EnsemblPlants.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR   InterPro; IPR046848; E_motif.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 6.
DR   PANTHER; PTHR47924:SF204; DYW_DEAMINASE DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR47924; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR   Pfam; PF20431; E_motif; 1.
DR   Pfam; PF01535; PPR; 5.
DR   Pfam; PF12854; PPR_1; 1.
DR   Pfam; PF13041; PPR_2; 1.
DR   PROSITE; PS51375; PPR; 4.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REPEAT          75..109
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          247..281
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          379..413
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          450..480
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ   SEQUENCE   611 AA;  68499 MW;  EE7268CF2FC5E077 CRC64;
     MSITKFARSN AFKPIPNFVR SSLRNACVES SQNTESPPYK PKKHHILATN LIVSYFEKGL
     VEEARSLFDE MPERDVVAWT AMITGYASSN YNSCAWECFH EMFKQGRSPN EFTLSSVLKS
     CRNMKVLAYG ALVHGVVVKL GMEGSLYVDN ALMNMYATCS VTMEAAFLIF RDIKVKNDVT
     WTTLITGFTH LGDGIGGLKM YKQMLLENAD VTPYCITIAV RASASIDSVT TGKQIHASVV
     KRGFQSNLPV MNSILDFYCR CGYLSEAKRY FHEMEDKDLI TWNTLISELE RSDSSEALLM
     FQRFESQGFV PNCYTFTSLV AACANIAALN CGQQLHGRIY RRGFNKNVEL ANALIDMYAK
     CGDIPDSERV FGEIEERRNL VSWTSMMIGY GSHGYGAEAV ELFDKMVSSG IRPDRIVFMA
     VLSACRHAGL VEKGLKYFNV MESEYGINPD RDIYNCVVDL LGRAGKIGEA YELVERMPFK
     PDESTWGAIL GACKAHKHTG LISRLAAKKV MELKPRMVGT YVMLSYIYAA EGKWVEFARV
     RKMMRMMGNK KEAGMSWIEV ENQVFSFAVS DKMCPNASSV YSVLGLLIEE TKEAGYVPDL
     DSLVYDQEVG T
//