ID D7KG17_ARALL Unreviewed; 343 AA.
AC D7KG17;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 24-JAN-2024, entry version 47.
DE SubName: Full=Pentatricopeptide repeat-containing protein {ECO:0000313|EMBL:EFH68590.1};
GN ORFNames=ARALYDRAFT_887829 {ECO:0000313|EMBL:EFH68590.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; GL348713; EFH68590.1; -; Genomic_DNA.
DR RefSeq; XP_002892331.1; XM_002892285.1.
DR AlphaFoldDB; D7KG17; -.
DR STRING; 81972.D7KG17; -.
DR EnsemblPlants; scaffold_100623.1; scaffold_100623.1; scaffold_100623.1.
DR GeneID; 9328393; -.
DR Gramene; scaffold_100623.1; scaffold_100623.1; scaffold_100623.1.
DR KEGG; aly:9328393; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_835215_0_0_1; -.
DR OrthoDB; 470100at2759; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 2.
DR PANTHER; PTHR47939; MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKE; 1.
DR PANTHER; PTHR47939:SF3; OS03G0201400 PROTEIN; 1.
DR Pfam; PF13041; PPR_2; 1.
DR PROSITE; PS51375; PPR; 2.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 170..204
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 205..240
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 343 AA; 38952 MW; 48116F2D884D93C2 CRC64;
MAFRLTHLRK PLAYARSFNA CFPFFRSISS FEAVEKAIKC AVETKEYLRI PELVVSLKEP
YQNSMLFSFL SAFQHQHRIR VIDEILQSFV PVRPRSLPKI VYSSLLTYCL QSSDPLPLSF
AILQRTLRSG CLPNPQTQLL LSDAWLERRR GSQSVADIIN EMKLIGYSPD TGTCNYLVSS
LCAVDKLDEA IKVVEEMGAA GCIPDVESYG AVINSLCLAR KTNDVVKIVK EMVSKAGISP
RKGMLTKVAA ALRANREIWK AIEMIEFVES RDYPVEFESY EVVVEGCLEV REYILAGKMV
MRMTDRGFIP YIKVRQKVVE RLISIGEWKL ACTVRQRLSE LRS
//