ID D7KP55_ARALL Unreviewed; 409 AA.
AC D7KP55;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 08-NOV-2023, entry version 43.
DE SubName: Full=Pentatricopeptide repeat-containing protein {ECO:0000313|EMBL:EFH68293.1};
GN ORFNames=ARALYDRAFT_470077 {ECO:0000313|EMBL:EFH68293.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
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DR EMBL; GL348713; EFH68293.1; -; Genomic_DNA.
DR RefSeq; XP_002892034.1; XM_002891988.1.
DR AlphaFoldDB; D7KP55; -.
DR STRING; 81972.D7KP55; -.
DR EnsemblPlants; fgenesh2_kg.1__31__AT1G01970.1; fgenesh2_kg.1__31__AT1G01970.1; fgenesh2_kg.1__31__AT1G01970.1.
DR GeneID; 9325408; -.
DR Gramene; fgenesh2_kg.1__31__AT1G01970.1; fgenesh2_kg.1__31__AT1G01970.1; fgenesh2_kg.1__31__AT1G01970.1.
DR KEGG; aly:9325408; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_053045_0_0_1; -.
DR OrthoDB; 361077at2759; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 3.
DR PANTHER; PTHR46862; OS07G0661900 PROTEIN; 1.
DR PANTHER; PTHR46862:SF3; OS07G0661900 PROTEIN; 1.
DR Pfam; PF01535; PPR; 3.
DR Pfam; PF13812; PPR_3; 1.
DR PROSITE; PS51375; PPR; 4.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 164..198
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 234..268
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 269..303
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 304..338
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 409 AA; 45971 MW; 4DF14AECF1A63B4C CRC64;
MGIYSCSAVL SFGLKCPLVI ARHRLYHRMF RRIPLLVESR LNRLCSCKCS ASLAIGEVVE
KEDTEQIPRS NWVDVGLDLT EEQDEAITRI PIKMSKRCQA LMRQIICFSS EKGSFCDLLG
AWVRRMNPIR ADWLSILKEL KNLDSPFYIK VAEFSLLEDS FEANARDYTK IIHYYGKLNQ
VEDAERTLLS MKNRGFLIDQ VTLTAIVQLY SKAGYHKLAE ETFNEIKLIG EPLDNRSYGS
MIMAYIRAGA PEKGEALLRE MDSQEICAGR EVYKALLRAY SMGGDAEGAK RVFDAVQIAG
ITPDVKLCGL LINAYSVSGQ SQNARLAFEN MRKAGIKATD KCVALVLAAY EKEEKLNEAL
GFLVELEKDS IMVGKEASAV LAQWFKKLGV VEEVELLLRE FSSSQSQPL
//
