ID D7KWV2_ARALL Unreviewed; 461 AA.
AC D7KWV2;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 03-MAY-2023, entry version 50.
DE RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};
GN ORFNames=ARALYDRAFT_476009 {ECO:0000313|EMBL:EFH63466.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
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DR EMBL; GL348714; EFH63466.1; -; Genomic_DNA.
DR RefSeq; XP_002887207.1; XM_002887161.1.
DR AlphaFoldDB; D7KWV2; -.
DR STRING; 81972.D7KWV2; -.
DR EnsemblPlants; fgenesh2_kg.2__1139__AT1G68820.1; fgenesh2_kg.2__1139__AT1G68820.1; fgenesh2_kg.2__1139__AT1G68820.1.
DR GeneID; 9323272; -.
DR Gramene; fgenesh2_kg.2__1139__AT1G68820.1; fgenesh2_kg.2__1139__AT1G68820.1; fgenesh2_kg.2__1139__AT1G68820.1.
DR KEGG; aly:9323272; -.
DR eggNOG; KOG1100; Eukaryota.
DR HOGENOM; CLU_031159_0_0_1; -.
DR OrthoDB; 451199at2759; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR019396; TM_Fragile-X-F-assoc.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46859; TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN; 1.
DR PANTHER; PTHR46859:SF6; TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN; 1.
DR Pfam; PF10269; Tmemb_185A; 1.
DR Pfam; PF13920; zf-C3HC4_3; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT TRANSMEM 37..57
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 69..91
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 138..161
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 173..193
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 276..298
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 414..449
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
SQ SEQUENCE 461 AA; 52783 MW; C031EF6BF9968949 CRC64;
MSWRRVWKSF QAASAHCLLF SFTLLLALKL DHVVSHSWWF IFTPLWLFHA VIARGRFSLP
APSMPHDRHW APFHSVMATP LLVAFEILLC VHLEDKYVVD LKIVFLPLLA FEVAILIDNV
RMCRTLMPGD EETMSDEAIW ETLPHFWVSI SMVFFIAATT FTLLKLCGDV AALGWWDLFI
NFGIAECFAF LVCTKWSNQS IHRYSHIPEP SSSSMVVRYL DWNRGLVVTA DDEHQQSNRI
CGLQDIGGHV MKIPFVTFQI ILFMRLEGTP ASAKNIPILV LFVPLFLLQG AGVLFATYRL
VEKSVLLINS GSGSYGRYFT ATSSAREYLG FFQHGARLLG WWSIDEGSRE EQARLYSGEA
TGYNTFSPEV VKKMPKSDLV EEIWRLQAAL SEQTDITNYS QQEYERLQNE KILCRVCFED
PINVVLLPCR HHVLCSTCCE KCTKCPICRV LIEERMPVYD V
//
