ID D7L0U0_ARALL Unreviewed; 954 AA.
AC D7L0U0;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 24-JAN-2024, entry version 69.
DE SubName: Full=Transducin family protein {ECO:0000313|EMBL:EFH61706.1};
GN ORFNames=ARALYDRAFT_479673 {ECO:0000313|EMBL:EFH61706.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
CC -!- SIMILARITY: Belongs to the WD repeat WDR3/UTP12 family.
CC {ECO:0000256|ARBA:ARBA00038229}.
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DR EMBL; GL348715; EFH61706.1; -; Genomic_DNA.
DR RefSeq; XP_002885447.1; XM_002885401.1.
DR AlphaFoldDB; D7L0U0; -.
DR STRING; 81972.D7L0U0; -.
DR EnsemblPlants; fgenesh2_kg.3__2374__AT3G21540.1; fgenesh2_kg.3__2374__AT3G21540.1; fgenesh2_kg.3__2374__AT3G21540.1.
DR Gramene; fgenesh2_kg.3__2374__AT3G21540.1; fgenesh2_kg.3__2374__AT3G21540.1; fgenesh2_kg.3__2374__AT3G21540.1.
DR eggNOG; KOG0306; Eukaryota.
DR HOGENOM; CLU_005318_0_1_1; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR GO; GO:0005730; C:nucleolus; IEA:UniProt.
DR GO; GO:0042254; P:ribosome biogenesis; IEA:UniProt.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 4.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR007148; SSU_processome_Utp12.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR19853; WD REPEAT CONTAINING PROTEIN 3 WDR3; 1.
DR PANTHER; PTHR19853:SF0; WD REPEAT-CONTAINING PROTEIN 3; 1.
DR Pfam; PF04003; Utp12; 1.
DR Pfam; PF00400; WD40; 10.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 11.
DR SUPFAM; SSF50978; WD40 repeat-like; 2.
DR PROSITE; PS00678; WD_REPEATS_1; 2.
DR PROSITE; PS50082; WD_REPEATS_2; 8.
DR PROSITE; PS50294; WD_REPEATS_REGION; 7.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT REPEAT 102..135
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 144..185
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 186..227
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 402..442
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 483..515
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 578..619
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 620..661
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 662..694
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT DOMAIN 796..897
FT /note="Small-subunit processome Utp12"
FT /evidence="ECO:0000259|Pfam:PF04003"
FT REGION 301..336
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 919..954
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 318..336
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 954 AA; 106106 MW; 87090935DD3E6791 CRC64;
MVKAYLRYEA ASSFGVISSV DSNITYDSTG KHVLAPALEK VGIWHVRQGV CTKTLNPSSS
RGGPSLAVTS IASSASSLVA VGYADGSIRI WDCEKGTCEV NFNSHKGAVT ALRYNKVGSM
LASGSKDNDV ILWDVVGESG LFRLRGHRDQ VTDLVFLDGG KKLVSSSKDK FLRVWDLETQ
HCMQIVSGHH SEVWSVDADP EERFVVTGSA DQELRFYAVK EYSSHGSLVS DSNANEIKTG
EEHSTENKWE ILKPFGEIQR QTKDRVARVR FNVSGKLLAC QMAGKTVEIF RVLDEAEAKK
KAKRRLHRKE KKTSKVGDEN LTANGEASTK IEQADTVSSP TVPDVFKLLQ VIRAGRKISS
FSFCPVTPKE SLGTVALSLN NNSLEFYSLK SSENEKTVTI EHQGHRSDVR SVTLSEDNTL
LMSTSHSEVK IWNPSTGSCL RTIDSGYGLC SLIVPQNKYG IVGTKSGVLE IIDIGSATKV
EEVEAHGGTI WSITAIPNDN GFVTVSADHE VKFWDYQVKQ KSGKATKQLT VSNVKSMKMN
DDVLAVAISP DAKHIAVALL DSTVKVFYMD SLKFYLSLYG HKLPVMCIDI SSDGELIVTG
SQDKNLKIWG LDFGDCHKSI FAHGDSVMGV KFVRNTHYLF SIGKDRLVKY WDADKFELLL
TLEGHHAEIW CLAVSNRGDF LVTGSHDRSM RRWDRSEEPF FLEVEKEKRL EELFESEIDN
EDRHGPMEEI PEEGVAAALA GKKTIDILSA ADSIIDALEV AEDEKNRHAA YEEEKTKGKV
PEYLPNAVMF GLSPTDYVLR AISNVRTNDL EQTLLALPFS ESLKFLCYMK DWSLIPEKVE
LVSRIATIIL QTHHNQLVTT PSARPVLSVL RDILYSKIKA CKDTIGFNLA AMDHVKQMMD
SRSDAPFKDA KAKLMEIRSQ QAKRMASRAD TKMEKKRKKK QKKLEEGQHG HALF
//