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Database: UniProt
Entry: D7L0U0_ARALL
LinkDB: D7L0U0_ARALL
Original site: D7L0U0_ARALL 
ID   D7L0U0_ARALL            Unreviewed;       954 AA.
AC   D7L0U0;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   24-JAN-2024, entry version 69.
DE   SubName: Full=Transducin family protein {ECO:0000313|EMBL:EFH61706.1};
GN   ORFNames=ARALYDRAFT_479673 {ECO:0000313|EMBL:EFH61706.1};
OS   Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN   [1] {ECO:0000313|Proteomes:UP000008694}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX   PubMed=21478890; DOI=10.1038/ng.807;
RA   Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA   Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA   Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA   Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA   Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA   Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT   "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT   change.";
RL   Nat. Genet. 43:476-481(2011).
CC   -!- SIMILARITY: Belongs to the WD repeat WDR3/UTP12 family.
CC       {ECO:0000256|ARBA:ARBA00038229}.
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DR   EMBL; GL348715; EFH61706.1; -; Genomic_DNA.
DR   RefSeq; XP_002885447.1; XM_002885401.1.
DR   AlphaFoldDB; D7L0U0; -.
DR   STRING; 81972.D7L0U0; -.
DR   EnsemblPlants; fgenesh2_kg.3__2374__AT3G21540.1; fgenesh2_kg.3__2374__AT3G21540.1; fgenesh2_kg.3__2374__AT3G21540.1.
DR   Gramene; fgenesh2_kg.3__2374__AT3G21540.1; fgenesh2_kg.3__2374__AT3G21540.1; fgenesh2_kg.3__2374__AT3G21540.1.
DR   eggNOG; KOG0306; Eukaryota.
DR   HOGENOM; CLU_005318_0_1_1; -.
DR   Proteomes; UP000008694; Unassembled WGS sequence.
DR   GO; GO:0005730; C:nucleolus; IEA:UniProt.
DR   GO; GO:0042254; P:ribosome biogenesis; IEA:UniProt.
DR   CDD; cd00200; WD40; 1.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 4.
DR   InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR   InterPro; IPR007148; SSU_processome_Utp12.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   InterPro; IPR019775; WD40_repeat_CS.
DR   InterPro; IPR036322; WD40_repeat_dom_sf.
DR   InterPro; IPR001680; WD40_rpt.
DR   PANTHER; PTHR19853; WD REPEAT CONTAINING PROTEIN 3 WDR3; 1.
DR   PANTHER; PTHR19853:SF0; WD REPEAT-CONTAINING PROTEIN 3; 1.
DR   Pfam; PF04003; Utp12; 1.
DR   Pfam; PF00400; WD40; 10.
DR   PRINTS; PR00320; GPROTEINBRPT.
DR   SMART; SM00320; WD40; 11.
DR   SUPFAM; SSF50978; WD40 repeat-like; 2.
DR   PROSITE; PS00678; WD_REPEATS_1; 2.
DR   PROSITE; PS50082; WD_REPEATS_2; 8.
DR   PROSITE; PS50294; WD_REPEATS_REGION; 7.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW   ProRule:PRU00221}.
FT   REPEAT          102..135
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          144..185
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          186..227
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          402..442
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          483..515
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          578..619
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          620..661
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          662..694
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   DOMAIN          796..897
FT                   /note="Small-subunit processome Utp12"
FT                   /evidence="ECO:0000259|Pfam:PF04003"
FT   REGION          301..336
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          919..954
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        318..336
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   954 AA;  106106 MW;  87090935DD3E6791 CRC64;
     MVKAYLRYEA ASSFGVISSV DSNITYDSTG KHVLAPALEK VGIWHVRQGV CTKTLNPSSS
     RGGPSLAVTS IASSASSLVA VGYADGSIRI WDCEKGTCEV NFNSHKGAVT ALRYNKVGSM
     LASGSKDNDV ILWDVVGESG LFRLRGHRDQ VTDLVFLDGG KKLVSSSKDK FLRVWDLETQ
     HCMQIVSGHH SEVWSVDADP EERFVVTGSA DQELRFYAVK EYSSHGSLVS DSNANEIKTG
     EEHSTENKWE ILKPFGEIQR QTKDRVARVR FNVSGKLLAC QMAGKTVEIF RVLDEAEAKK
     KAKRRLHRKE KKTSKVGDEN LTANGEASTK IEQADTVSSP TVPDVFKLLQ VIRAGRKISS
     FSFCPVTPKE SLGTVALSLN NNSLEFYSLK SSENEKTVTI EHQGHRSDVR SVTLSEDNTL
     LMSTSHSEVK IWNPSTGSCL RTIDSGYGLC SLIVPQNKYG IVGTKSGVLE IIDIGSATKV
     EEVEAHGGTI WSITAIPNDN GFVTVSADHE VKFWDYQVKQ KSGKATKQLT VSNVKSMKMN
     DDVLAVAISP DAKHIAVALL DSTVKVFYMD SLKFYLSLYG HKLPVMCIDI SSDGELIVTG
     SQDKNLKIWG LDFGDCHKSI FAHGDSVMGV KFVRNTHYLF SIGKDRLVKY WDADKFELLL
     TLEGHHAEIW CLAVSNRGDF LVTGSHDRSM RRWDRSEEPF FLEVEKEKRL EELFESEIDN
     EDRHGPMEEI PEEGVAAALA GKKTIDILSA ADSIIDALEV AEDEKNRHAA YEEEKTKGKV
     PEYLPNAVMF GLSPTDYVLR AISNVRTNDL EQTLLALPFS ESLKFLCYMK DWSLIPEKVE
     LVSRIATIIL QTHHNQLVTT PSARPVLSVL RDILYSKIKA CKDTIGFNLA AMDHVKQMMD
     SRSDAPFKDA KAKLMEIRSQ QAKRMASRAD TKMEKKRKKK QKKLEEGQHG HALF
//
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