ID D7L2S7_ARALL Unreviewed; 829 AA.
AC D7L2S7;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 59.
DE SubName: Full=Pentatricopeptide repeat-containing protein {ECO:0000313|EMBL:EFH60443.1};
GN ORFNames=ARALYDRAFT_480837 {ECO:0000313|EMBL:EFH60443.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; GL348715; EFH60443.1; -; Genomic_DNA.
DR RefSeq; XP_002884184.1; XM_002884138.1.
DR AlphaFoldDB; D7L2S7; -.
DR STRING; 81972.D7L2S7; -.
DR EnsemblPlants; fgenesh2_kg.3__3538__AT2G18940.1; fgenesh2_kg.3__3538__AT2G18940.1; fgenesh2_kg.3__3538__AT2G18940.1.
DR Gramene; fgenesh2_kg.3__3538__AT2G18940.1; fgenesh2_kg.3__3538__AT2G18940.1; fgenesh2_kg.3__3538__AT2G18940.1.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_8_1; -.
DR OrthoDB; 1215801at2759; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR GO; GO:0003729; F:mRNA binding; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR044179; PPR5-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR NCBIfam; TIGR00756; PPR; 15.
DR PANTHER; PTHR47874; EXPRESSED PROTEIN; 1.
DR PANTHER; PTHR47874:SF5; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PPR5 HOMOLOG, CHLOROPLASTIC; 1.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 3.
DR Pfam; PF13812; PPR_3; 4.
DR SUPFAM; SSF81901; HCP-like; 1.
DR PROSITE; PS51375; PPR; 15.
DR PROSITE; PS50005; TPR; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT REPEAT 216..250
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 217..250
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 251..286
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 287..321
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 322..356
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 357..391
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 392..426
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 427..461
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 462..496
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 497..531
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 532..566
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 637..671
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 672..706
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 707..741
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 742..776
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 777..807
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 1..36
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 19..35
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 829 AA; 93096 MW; FB0277B94ED6B054 CRC64;
MDGALFPHKP PYPIQSKRSP PPQSSNQSIK FSSATLHLPP PSPPSFPLDS LLHHLVHLSS
TPPRHAAARF PSLEVSTSSA HKWRHESTKP MSSSVLGVEI ENERDGSLKL LCKKEVVLVN
SIVEQPLPRL SSFFDSVKSE LLTTDLVSLV KGLDDSGHWE RAVFLFEWLV LSSNSGALKL
DHHVIEILVR ILGRESQYSV AAKLLDKIPL QDYMLDVRAY TTILHAYSRT GKYEKAINLF
ERMKEMGPSP TLVTYNVILD VFGKMGRSWR KILGVLEEMR SKGLKFDEFT CSTVLSACAR
EGLLREAKDF FAELKSCGYE PGTVTYNALL QVFGKAGVYT EALSVLKEME ENNCPADSVT
YNELVAAYAR AGFSKEAAVV IEMMTQKGVM PNAITYTTVI DAYGKAGKED EALKLFYSMK
EAGCVPNTCT YNAVLSMLGK KSRSNEMIKM LCDMKSNGCF PNRATWNTIL ALCGNKGMDK
FVNRVFREMK SCGFEPDRDT FNTLISAYGR CGSEVDASKM YGEMTRAGFN ACVTTYNALL
NALARKGDWR SGENVISDMK SKGFKPTETS YSLMLQCYAK GGNYLGIERI EEGINEGQIF
PSWMLLRTLL LANFKCRALA GSERAFTLFK KHGYKPDMVI FNSMLSIFTR NNMYDQAEGI
LQSIHEDGLN PDLVTYNSLM DMYVRRGECW KAEEILKTLE KSQLKPDLVS YNTVIKGFCR
KGLMQEAVRM LSEMTERGIR PCIFTYNTFV SGYTAMGMYG EIEDVIECMA KNDCRPNELT
FKMVVDGYCR AGKYSEAMDF VSKIKTFDPC FDDQSIQRLA LRVRENLES
//
