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Database: UniProt
Entry: D7L872_ARALL
LinkDB: D7L872_ARALL
Original site: D7L872_ARALL 
ID   D7L872_ARALL            Unreviewed;       415 AA.
AC   D7L872;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   24-JAN-2024, entry version 63.
DE   RecName: Full=Histone-binding protein RBBP4 N-terminal domain-containing protein {ECO:0000259|Pfam:PF12265};
GN   ORFNames=ARALYDRAFT_480561 {ECO:0000313|EMBL:EFH62335.1};
OS   Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN   [1] {ECO:0000313|Proteomes:UP000008694}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX   PubMed=21478890; DOI=10.1038/ng.807;
RA   Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA   Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA   Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA   Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA   Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA   Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT   "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT   change.";
RL   Nat. Genet. 43:476-481(2011).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   -!- SIMILARITY: Belongs to the WD repeat RBAP46/RBAP48/MSI1 family.
CC       {ECO:0000256|ARBA:ARBA00009341}.
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DR   EMBL; GL348715; EFH62335.1; -; Genomic_DNA.
DR   RefSeq; XP_002886076.1; XM_002886030.1.
DR   AlphaFoldDB; D7L872; -.
DR   STRING; 81972.D7L872; -.
DR   EnsemblPlants; fgenesh2_kg.3__3262__AT2G16780.1; fgenesh2_kg.3__3262__AT2G16780.1; fgenesh2_kg.3__3262__AT2G16780.1.
DR   GeneID; 9320085; -.
DR   Gramene; fgenesh2_kg.3__3262__AT2G16780.1; fgenesh2_kg.3__3262__AT2G16780.1; fgenesh2_kg.3__3262__AT2G16780.1.
DR   KEGG; aly:9320085; -.
DR   eggNOG; KOG0264; Eukaryota.
DR   HOGENOM; CLU_020445_3_1_1; -.
DR   OrthoDB; 5472072at2759; -.
DR   Proteomes; UP000008694; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR   InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR   InterPro; IPR022052; Histone-bd_RBBP4_N.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   InterPro; IPR019775; WD40_repeat_CS.
DR   InterPro; IPR036322; WD40_repeat_dom_sf.
DR   InterPro; IPR001680; WD40_rpt.
DR   PANTHER; PTHR22850:SF196; WD-40 REPEAT-CONTAINING PROTEIN MSI2-RELATED; 1.
DR   PANTHER; PTHR22850; WD40 REPEAT FAMILY; 1.
DR   Pfam; PF12265; CAF1C_H4-bd; 1.
DR   Pfam; PF00400; WD40; 5.
DR   PRINTS; PR00320; GPROTEINBRPT.
DR   SMART; SM00320; WD40; 5.
DR   SUPFAM; SSF50978; WD40 repeat-like; 1.
DR   PROSITE; PS00678; WD_REPEATS_1; 2.
DR   PROSITE; PS50082; WD_REPEATS_2; 4.
DR   PROSITE; PS50294; WD_REPEATS_REGION; 3.
PE   3: Inferred from homology;
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW   ProRule:PRU00221}.
FT   DOMAIN          16..87
FT                   /note="Histone-binding protein RBBP4 N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF12265"
FT   REPEAT          164..206
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          213..255
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          300..335
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          359..393
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
SQ   SEQUENCE   415 AA;  46652 MW;  E8409966CB4CB7FC CRC64;
     MADEGKEDTG MDQVEEDFSV WKKNTPFLYD LLISHPLEWP SLTVHWVPST PSPYAADPYF
     GVHKLILGTH TSGSAQDFLM VADVVTPTPN GEPGLGGPNQ DPIIPKVEIR QKIRVDGEVN
     RARCMPQKPT LVGAKTSGCE VFLFDYAKHA ATPQTSECDP DLRLVGHDKE GYGLSWSPFK
     EGYLLSGSQD KKICLWDVSA TPQDKVLNAM FVYEGHESSI ADVSWHMKNE NLFGSAGEDG
     RLVIWDTRTN QMQHQVKIHE REVNYLSFNP FNEWVLATAS SDSTVALFDL RKLNAPLHVM
     SSHEGEVFQV EWDPNHETVL ASSGEDRRLM VWDLNRVGEE QLEIELDAED GPPELLFSHG
     GHKAKISDFA WNENEPWVIA SVAEDNSLQV WQMAESIYRD ENDAEDIKED ITQQS
//
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