GenomeNet

Database: UniProt
Entry: D7L8X6_ARALL
LinkDB: D7L8X6_ARALL
Original site: D7L8X6_ARALL 
ID   D7L8X6_ARALL            Unreviewed;       312 AA.
AC   D7L8X6;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   28-FEB-2018, entry version 48.
DE   SubName: Full=Transcription initiation factor IIB-2 {ECO:0000313|EMBL:EFH58920.1};
GN   ORFNames=ARALYDRAFT_478363 {ECO:0000313|EMBL:EFH58920.1};
OS   Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
OC   Arabidopsis.
OX   NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN   [1] {ECO:0000313|Proteomes:UP000008694}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX   PubMed=21478890; DOI=10.1038/ng.807;
RA   Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA   Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA   Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A.,
RA   Schneeberger K., Spannagl M., Wang X., Yang L., Nasrallah M.E.,
RA   Bergelson J., Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X.,
RA   Van de Peer Y., Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT   "The Arabidopsis lyrata genome sequence and the basis of rapid genome
RT   size change.";
RL   Nat. Genet. 43:476-481(2011).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; GL348715; EFH58920.1; -; Genomic_DNA.
DR   RefSeq; XP_002882661.1; XM_002882615.1.
DR   STRING; 59689.fgenesh2_kg.3__1064__AT3G10330.1; -.
DR   EnsemblPlants; fgenesh2_kg.3__1064__AT3G10330.1; fgenesh2_kg.3__1064__AT3G10330.1; fgenesh2_kg.3__1064__AT3G10330.1.
DR   Gramene; fgenesh2_kg.3__1064__AT3G10330.1; fgenesh2_kg.3__1064__AT3G10330.1; fgenesh2_kg.3__1064__AT3G10330.1.
DR   KEGG; aly:ARALYDRAFT_478363; -.
DR   KO; K03124; -.
DR   OrthoDB; EOG09360GT4; -.
DR   Proteomes; UP000008694; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IEA:EnsemblPlants.
DR   GO; GO:0005634; C:nucleus; IEA:EnsemblPlants.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0017025; F:TBP-class protein binding; IEA:InterPro.
DR   GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0070897; P:DNA-templated transcriptional preinitiation complex assembly; IEA:InterPro.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR   CDD; cd00043; CYCLIN; 2.
DR   InterPro; IPR013763; Cyclin-like.
DR   InterPro; IPR036915; Cyclin-like_sf.
DR   InterPro; IPR000812; TFIIB.
DR   InterPro; IPR023486; TFIIB_CS.
DR   InterPro; IPR013150; TFIIB_cyclin.
DR   InterPro; IPR013137; Znf_TFIIB.
DR   PANTHER; PTHR11618; PTHR11618; 1.
DR   Pfam; PF08271; TF_Zn_Ribbon; 1.
DR   Pfam; PF00382; TFIIB; 2.
DR   PRINTS; PR00685; TIFACTORIIB.
DR   SMART; SM00385; CYCLIN; 2.
DR   SUPFAM; SSF47954; SSF47954; 2.
DR   PROSITE; PS00782; TFIIB; 1.
DR   PROSITE; PS51134; ZF_TFIIB; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000008694};
KW   Initiation factor {ECO:0000313|EMBL:EFH58920.1};
KW   Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00469};
KW   Protein biosynthesis {ECO:0000313|EMBL:EFH58920.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW   Zinc {ECO:0000256|PROSITE-ProRule:PRU00469};
KW   Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00469}.
FT   DOMAIN        2     34       TFIIB-type. {ECO:0000259|PROSITE:
FT                                PS51134}.
FT   ZN_FING       2     34       TFIIB-type. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00469}.
SQ   SEQUENCE   312 AA;  34196 MW;  7875503FE32C324B CRC64;
     MSDAFCSDCK RHTEVVFDHS AGDTVCSECG LVLESHSIDE TSEWRTFANE SGDNDPVRVG
     GPTNPLLADG GLTTVISKPN GSSGDFLSSS LGRWQNRGSN PDRGLIVAFK TIATMADRLG
     LVATIKDRAN EIYKRVEDQK SSRGRNQDAL LAACLYIACR QEDKPRTVKE ICSVANGATK
     KEIGRAKEYI VKQLGLETGQ SVEMGTIHAG DFMRRFCSNL GMTNQTVKAA QESVQKSEEF
     DIRRSPISIA AAVIYIITQL SDEKKPLRDI SVATGVAEGT IRNSYKDLYP HLSKIIPAWY
     AKEEDLKNLQ SP
//
DBGET integrated database retrieval system