ID D7LBI6_ARALL Unreviewed; 202 AA.
AC D7LBI6;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE RecName: Full=RNase H type-1 domain-containing protein {ECO:0000259|Pfam:PF13456};
GN ORFNames=ARALYDRAFT_901248 {ECO:0000313|EMBL:EFH55150.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
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DR EMBL; GL348716; EFH55150.1; -; Genomic_DNA.
DR RefSeq; XP_002878891.1; XM_002878845.1.
DR AlphaFoldDB; D7LBI6; -.
DR EnsemblPlants; scaffold_400749.1; scaffold_400749.1; scaffold_400749.1.
DR GeneID; 9316778; -.
DR Gramene; scaffold_400749.1; scaffold_400749.1; scaffold_400749.1.
DR KEGG; aly:9316778; -.
DR eggNOG; KOG1075; Eukaryota.
DR HOGENOM; CLU_000680_5_2_1; -.
DR OrthoDB; 692510at2759; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR CDD; cd06222; RNase_H_like; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR044730; RNase_H-like_dom_plant.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR47074; BNAC02G40300D PROTEIN; 1.
DR PANTHER; PTHR47074:SF68; GB|AAF30348.1-RELATED; 1.
DR Pfam; PF13456; RVT_3; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008694}.
FT DOMAIN 52..172
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|Pfam:PF13456"
SQ SEQUENCE 202 AA; 23495 MW; E2B7A377196ADC7D CRC64;
MMSLKFARDD AKEWMEMKVA HNPGDIQPQQ PETNPARYQN WQPPAIGWLK CNYDGSFVSS
NLPAKSGWII RDHNRVYMGS GQAMGGVLND AMECELQSLI IAMQHCWTRG YQRVCFEGDN
QEVVKLINGT KINFGSYNWI REVKRWKMKF DAVEFKWINR SCNKPADILA KKEIPNNSSF
FFHSLIPRVI SDVLQCDYYS YH
//
