ID D7LCG2_ARALL Unreviewed; 867 AA.
AC D7LCG2;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 24-JAN-2024, entry version 55.
DE SubName: Full=Pentatricopeptide repeat-containing protein {ECO:0000313|EMBL:EFH56047.1};
GN ORFNames=ARALYDRAFT_903164 {ECO:0000313|EMBL:EFH56047.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; GL348716; EFH56047.1; -; Genomic_DNA.
DR RefSeq; XP_002879788.1; XM_002879742.1.
DR AlphaFoldDB; D7LCG2; -.
DR STRING; 81972.D7LCG2; -.
DR EnsemblPlants; scaffold_402665.1; scaffold_402665.1; scaffold_402665.1.
DR GeneID; 9317704; -.
DR Gramene; scaffold_402665.1; scaffold_402665.1; scaffold_402665.1.
DR KEGG; aly:9317704; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_12_1; -.
DR OrthoDB; 447915at2759; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 15.
DR PANTHER; PTHR47447; OS03G0856100 PROTEIN; 1.
DR Pfam; PF01535; PPR; 7.
DR Pfam; PF12854; PPR_1; 3.
DR Pfam; PF13041; PPR_2; 4.
DR SUPFAM; SSF81901; HCP-like; 2.
DR PROSITE; PS51375; PPR; 17.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 168..202
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 238..272
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 273..307
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 309..343
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 344..378
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 379..413
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 448..482
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 483..517
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 518..552
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 553..588
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 589..623
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 624..658
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 659..693
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 694..728
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 729..763
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 764..798
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 799..833
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 867 AA; 97463 MW; 8CD9A83A327D32BC CRC64;
MSTFVASKRF RPPLFLHRLI NPKPISSQYR FLHPPDNQSR DISDSTTEVF SELEFPHKAS
GPNHSPLIST SETDNHVDDA HVIEVLLGRR NDPVSALQYC NWVKPLRSLC EGGDVFWVLI
HILFSSPHTH DRASNLLVMF VSSNPTLIPS AMVNNLVDSS KRFDFELSSR AFNYLLNAYI
RNRRMDYAVD CFNLMVDRNV VPFVPYVNNV LSSLVRSNLI DEAKEIYNKM VLIGVAGDNV
TTQLLMRASL RERKPEEAMK IFRRVMSRGA EPDGLLFSLA VQAACKMKDL VMALDLLREM
REKGGVPASQ ETYTSVIVAC VKEGNMEEAV KVKDEMVGFG IPMSVIAATS LITGFCNGNE
LGKALDFFNR MEEEGLAPDK VMFSVMIEWF CKNMEMEKAV EIYKRMKSVG IAPSSVLVHK
MIQGCLKAES PEAALEIFND SFETWIAHGF MCNKIFLLLC KQGKVDAATS FLRMMENKGI
EPNVVFYNNM MLAHCRMKNM DLARSIFSEM LEKGLQPNNF TYSILIDGFF KNQDEQNAWE
VINQMIASNF EANEVIYNTI INGLCKVGQT SKAKEMLQNL IKEKRYSMGC TSYNSIIDGF
FKEGDTDSAV EAYREMSENG ISPNVVTFTS LINGFCKSNR MDLALEMIHE MKSKDLKLDV
PAYGALIDGF CKKNDMKTAY TLFSELLELG LMPNVSVYNN LISGFRNLGK MDAAIDLYKK
MVNDGISCDL FTYTTMIDGL LKDGNLILAS DLYSELLALG IVPDEILYVV LVNGLSKKGQ
FVRASKMLEE MKKKDATPNV LIYSTVIAGH HREGNLNEAF RVHDEMLEKG LVHDDTIFNL
LVSGRVEKPP AAAKISSLAS PEMRSSY
//