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Database: UniProt
Entry: D7LCG2_ARALL
LinkDB: D7LCG2_ARALL
Original site: D7LCG2_ARALL 
ID   D7LCG2_ARALL            Unreviewed;       867 AA.
AC   D7LCG2;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   24-JAN-2024, entry version 55.
DE   SubName: Full=Pentatricopeptide repeat-containing protein {ECO:0000313|EMBL:EFH56047.1};
GN   ORFNames=ARALYDRAFT_903164 {ECO:0000313|EMBL:EFH56047.1};
OS   Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN   [1] {ECO:0000313|Proteomes:UP000008694}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX   PubMed=21478890; DOI=10.1038/ng.807;
RA   Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA   Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA   Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA   Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA   Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA   Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT   "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT   change.";
RL   Nat. Genet. 43:476-481(2011).
CC   -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC       {ECO:0000256|ARBA:ARBA00007626}.
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DR   EMBL; GL348716; EFH56047.1; -; Genomic_DNA.
DR   RefSeq; XP_002879788.1; XM_002879742.1.
DR   AlphaFoldDB; D7LCG2; -.
DR   STRING; 81972.D7LCG2; -.
DR   EnsemblPlants; scaffold_402665.1; scaffold_402665.1; scaffold_402665.1.
DR   GeneID; 9317704; -.
DR   Gramene; scaffold_402665.1; scaffold_402665.1; scaffold_402665.1.
DR   KEGG; aly:9317704; -.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_49_12_1; -.
DR   OrthoDB; 447915at2759; -.
DR   Proteomes; UP000008694; Unassembled WGS sequence.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 15.
DR   PANTHER; PTHR47447; OS03G0856100 PROTEIN; 1.
DR   Pfam; PF01535; PPR; 7.
DR   Pfam; PF12854; PPR_1; 3.
DR   Pfam; PF13041; PPR_2; 4.
DR   SUPFAM; SSF81901; HCP-like; 2.
DR   PROSITE; PS51375; PPR; 17.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REPEAT          168..202
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          238..272
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          273..307
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          309..343
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          344..378
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          379..413
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          448..482
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          483..517
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          518..552
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          553..588
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          589..623
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          624..658
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          659..693
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          694..728
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          729..763
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          764..798
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          799..833
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ   SEQUENCE   867 AA;  97463 MW;  8CD9A83A327D32BC CRC64;
     MSTFVASKRF RPPLFLHRLI NPKPISSQYR FLHPPDNQSR DISDSTTEVF SELEFPHKAS
     GPNHSPLIST SETDNHVDDA HVIEVLLGRR NDPVSALQYC NWVKPLRSLC EGGDVFWVLI
     HILFSSPHTH DRASNLLVMF VSSNPTLIPS AMVNNLVDSS KRFDFELSSR AFNYLLNAYI
     RNRRMDYAVD CFNLMVDRNV VPFVPYVNNV LSSLVRSNLI DEAKEIYNKM VLIGVAGDNV
     TTQLLMRASL RERKPEEAMK IFRRVMSRGA EPDGLLFSLA VQAACKMKDL VMALDLLREM
     REKGGVPASQ ETYTSVIVAC VKEGNMEEAV KVKDEMVGFG IPMSVIAATS LITGFCNGNE
     LGKALDFFNR MEEEGLAPDK VMFSVMIEWF CKNMEMEKAV EIYKRMKSVG IAPSSVLVHK
     MIQGCLKAES PEAALEIFND SFETWIAHGF MCNKIFLLLC KQGKVDAATS FLRMMENKGI
     EPNVVFYNNM MLAHCRMKNM DLARSIFSEM LEKGLQPNNF TYSILIDGFF KNQDEQNAWE
     VINQMIASNF EANEVIYNTI INGLCKVGQT SKAKEMLQNL IKEKRYSMGC TSYNSIIDGF
     FKEGDTDSAV EAYREMSENG ISPNVVTFTS LINGFCKSNR MDLALEMIHE MKSKDLKLDV
     PAYGALIDGF CKKNDMKTAY TLFSELLELG LMPNVSVYNN LISGFRNLGK MDAAIDLYKK
     MVNDGISCDL FTYTTMIDGL LKDGNLILAS DLYSELLALG IVPDEILYVV LVNGLSKKGQ
     FVRASKMLEE MKKKDATPNV LIYSTVIAGH HREGNLNEAF RVHDEMLEKG LVHDDTIFNL
     LVSGRVEKPP AAAKISSLAS PEMRSSY
//
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