ID D7LCI1_ARALL Unreviewed; 412 AA.
AC D7LCI1;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 48.
DE RecName: Full=Pentatricopeptide repeat-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=ARALYDRAFT_903976 {ECO:0000313|EMBL:EFH58265.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
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DR EMBL; GL348716; EFH58265.1; -; Genomic_DNA.
DR RefSeq; XP_002882006.1; XM_002881960.1.
DR AlphaFoldDB; D7LCI1; -.
DR STRING; 81972.D7LCI1; -.
DR EnsemblPlants; scaffold_403477.1; scaffold_403477.1; scaffold_403477.1.
DR Gramene; scaffold_403477.1; scaffold_403477.1; scaffold_403477.1.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_0_0_1; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 3.
DR PANTHER; PTHR47924:SF204; DYW_DEAMINASE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47924; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 5.
DR Pfam; PF13041; PPR_2; 1.
DR PROSITE; PS51375; PPR; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 50..84
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 112..146
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 412 AA; 46563 MW; 480E341C49237C34 CRC64;
MARKRGSEEA SSLEHRCPTQ RLTPSGTMLL KCRCNCSIAS KLFAEMPEKD LISWNSMIDG
YVKHGRIEDA KGLFDVMPRR DVVTCATMID GYAKLGFVHQ AKTLFDQMPL RDVVAYNSMM
AGYVQNKCHM EALEIFNDME KESHLSPDET TLVIILSAIA QLGRLSKATD MHLYIVEKQF
YLGGKLGVAL IDMYSKCGSI QHAMLVFEGI ENKSIDHWNA MIGGLAVHGL GESAFNMLLQ
IERLSIIPDD ITFVGVLNAC SHSGLVKEGL LCFELMRRKH KIEPRLQHYG CMVDILSRSG
SIELAKNLIE EMPIEPNDVI WRTFLTACSH HKEFETGELV AKHLILQAGY NPSSYVLLSN
MYASFGMWKD VRRVRTMMKE RKIEKIPGCS WIELDGRVHE FFVDSIEVSN TL
//
