ID D7LFJ8_ARALL Unreviewed; 617 AA.
AC D7LFJ8;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 62.
DE RecName: Full=F-box domain-containing protein {ECO:0000259|SMART:SM00256};
GN ORFNames=ARALYDRAFT_344438 {ECO:0000313|EMBL:EFH57135.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC Evidence={ECO:0000256|ARBA:ARBA00001947};
CC -!- PATHWAY: Protein modification; protein ubiquitination.
CC {ECO:0000256|ARBA:ARBA00004906}.
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DR EMBL; GL348716; EFH57135.1; -; Genomic_DNA.
DR RefSeq; XP_002880876.1; XM_002880830.1.
DR AlphaFoldDB; D7LFJ8; -.
DR EnsemblPlants; fgenesh1_pg.C_scaffold_4000780; fgenesh1_pg.C_scaffold_4000780; fgenesh1_pg.C_scaffold_4000780.
DR Gramene; fgenesh1_pg.C_scaffold_4000780; fgenesh1_pg.C_scaffold_4000780; fgenesh1_pg.C_scaffold_4000780.
DR eggNOG; KOG0441; Eukaryota.
DR eggNOG; KOG1724; Eukaryota.
DR HOGENOM; CLU_443031_0_0_1; -.
DR UniPathway; UPA00143; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:InterPro.
DR GO; GO:0016567; P:protein ubiquitination; IEA:UniProtKB-UniPathway.
DR GO; GO:0042221; P:response to chemical; IEA:UniProt.
DR GO; GO:0006801; P:superoxide metabolic process; IEA:InterPro.
DR GO; GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro.
DR CDD; cd22157; F-box_AtFBW1-like; 1.
DR Gene3D; 1.20.1280.50; -; 1.
DR Gene3D; 2.60.40.200; Superoxide dismutase, copper/zinc binding domain; 2.
DR InterPro; IPR013187; F-box-assoc_dom_typ3.
DR InterPro; IPR017451; F-box-assoc_interact_dom.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR036296; SKP1-like_dim_sf.
DR InterPro; IPR011333; SKP1/BTB/POZ_sf.
DR InterPro; IPR016072; Skp1_comp_dimer.
DR InterPro; IPR036423; SOD-like_Cu/Zn_dom_sf.
DR InterPro; IPR001424; SOD_Cu_Zn_dom.
DR NCBIfam; TIGR01640; F_box_assoc_1; 1.
DR PANTHER; PTHR31111; BNAA05G37150D PROTEIN-RELATED; 1.
DR PANTHER; PTHR31111:SF92; F-BOX DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF08268; FBA_3; 1.
DR Pfam; PF01466; Skp1; 1.
DR Pfam; PF00080; Sod_Cu; 1.
DR PRINTS; PR00068; CUZNDISMTASE.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF49329; Cu,Zn superoxide dismutase-like; 1.
DR SUPFAM; SSF81383; F-box domain; 1.
DR SUPFAM; SSF81382; Skp1 dimerisation domain-like; 1.
PE 4: Predicted;
KW Copper {ECO:0000256|ARBA:ARBA00023008};
KW Reference proteome {ECO:0000313|Proteomes:UP000008694}.
FT DOMAIN 95..134
FT /note="F-box"
FT /evidence="ECO:0000259|SMART:SM00256"
SQ SEQUENCE 617 AA; 68860 MW; D6A3B61C90643E86 CRC64;
MSMVTEATDY LCINSLVDLC CQTIADLITA CKTPSEIRTK FNIISSDFTP AEQDYVCKKN
QWAFESKDVA FTVSTYARFL FRRSRIRGGK DPDSFPDHLI EDVFTRMPAK SIARCCCVSK
AWASIISCPS FTTLFSSRVS PQLLFACSQK VTNSDYSVDG KLFFLSSPLP QTLEGFSSTL
PVNHQTDLSL LRGEEETNVS VNGLVLGVQE KPFTDNKYTM CECVIHNPST SKSITLPTLF
PARRRQFENT RRALGTQCYF GYDPVGKKYK VLSMTTMAPD GDGNALSRRH QCLTLRGGDD
LLWRSIHCGI EHFPIDHDPI CISGHIFYLA AQMINAEISM VVDFDVNSEK FTSIKYFDKT
LSMTRWESTY KDMATLFNFN GKLASHVTLE HMKSFELWLL DDPTNHRWSR QFHQFPDVSL
NCDPYIMCFA GVTHGNEAVW VPFTVPDVPP LSVLFYNLER KTVKSIQFRS SSLFEGNRFL
TSLNHIECMR NPWEDSKGVA VLKSSEGVNG TIVFTQEGEE CVTSVTVTVS GLKPGVHCIR
VHNVDLKEFH VEDDGTANFT ITDACQIALT GPNSISGRSV VILAYPDDLE KGSHEPSKAT
GEADGLVVAN GGIVLQG
//
