ID D7LGC7_ARALL Unreviewed; 713 AA.
AC D7LGC7;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 52.
DE SubName: Full=Pentatricopeptide repeat-containing protein {ECO:0000313|EMBL:EFH55723.1};
GN ORFNames=ARALYDRAFT_482316 {ECO:0000313|EMBL:EFH55723.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
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DR EMBL; GL348716; EFH55723.1; -; Genomic_DNA.
DR RefSeq; XP_002879464.1; XM_002879418.1.
DR AlphaFoldDB; D7LGC7; -.
DR STRING; 81972.D7LGC7; -.
DR EnsemblPlants; fgenesh2_kg.4__1376__AT2G33680.1; fgenesh2_kg.4__1376__AT2G33680.1; fgenesh2_kg.4__1376__AT2G33680.1.
DR Gramene; fgenesh2_kg.4__1376__AT2G33680.1; fgenesh2_kg.4__1376__AT2G33680.1; fgenesh2_kg.4__1376__AT2G33680.1.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_15_6_1; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 3.
DR PANTHER; PTHR47928:SF190; OS04G0110500 PROTEIN; 1.
DR PANTHER; PTHR47928; REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF13041; PPR_2; 4.
DR PROSITE; PS51375; PPR; 4.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 81..118
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 275..309
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 376..410
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 477..511
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 713 AA; 79065 MW; 2C5F01702652BE39 CRC64;
MYPSTFQTEI NPFSHTSTLL KALTHHSQHR NLVAGRAVHA QIIRTGTSTC TQHANVLVNF
YAKCGQLAKA HSIFNAIICK DVVSWNSLIT GYSQNGGISS SHTVMQLFRE MRAQDILPNA
YTLAGIFKAE SSLQSCTVGR QAHALVVKMS SFGDIYVDTS LVGMYCKAGL KYLYMVYYGF
WLCYKKDVLR RQLKSSICFL EEKEKESDSD YVFTAVLSSL AATVYVGLGR QIHGITVKNG
LLGFVALSNA LVTMYSKCES LNEACKMFDS SGDRNSITWS AMVTGYSQNG ESLEAIKLFS
RMFSAGIKPS EYTIVGVLNA CSDICYLVEG KQLHSFLLKL GFERHLFATT ALVDMYAKAG
CLADARKGFD CLQERDVALW TSLISGYVQN SDNEEALILY RRMKTAGIIP NDPTMASVLK
ACSSLATLEL GKQVHGHTIK HGFGLEVPIG SALSTMYTKC GSLEDGNLVF RRTPNKDVVS
WNAMISGLSH NGQGDEALEL FEEMLAEGTE PDDVTFVNII SACSHKGFVE RGWSYFHMMS
DQFGLDPKVD HYACMVDVLS RAGQLKETKE FIESASIDHG LCLWRILLSA CKNHGNCELG
VYAGEKLMSL GSRESSTYVQ LAGIYTALGR MRDVERVWKL MRTNGVSKEV GCSWIALKNQ
WHVFVVGDTM HPRIEETKDL VSLVSRQMLE EGFVTVLNSS YVEEEEHNYV LLS
//
