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Database: UniProt
Entry: D7LNW5_ARALL
LinkDB: D7LNW5_ARALL
Original site: D7LNW5_ARALL 
ID   D7LNW5_ARALL            Unreviewed;       498 AA.
AC   D7LNW5;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   24-JAN-2024, entry version 53.
DE   RecName: Full=Pentatricopeptide repeat-containing protein {ECO:0008006|Google:ProtNLM};
GN   ORFNames=ARALYDRAFT_484700 {ECO:0000313|EMBL:EFH51766.1};
OS   Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN   [1] {ECO:0000313|Proteomes:UP000008694}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX   PubMed=21478890; DOI=10.1038/ng.807;
RA   Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA   Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA   Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA   Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA   Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA   Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT   "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT   change.";
RL   Nat. Genet. 43:476-481(2011).
CC   -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC       {ECO:0000256|ARBA:ARBA00007626}.
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DR   EMBL; GL348717; EFH51766.1; -; Genomic_DNA.
DR   RefSeq; XP_002875507.1; XM_002875461.1.
DR   AlphaFoldDB; D7LNW5; -.
DR   STRING; 81972.D7LNW5; -.
DR   EnsemblPlants; fgenesh2_kg.5__692__AT3G29290.1; fgenesh2_kg.5__692__AT3G29290.1; fgenesh2_kg.5__692__AT3G29290.1.
DR   Gramene; fgenesh2_kg.5__692__AT3G29290.1; fgenesh2_kg.5__692__AT3G29290.1; fgenesh2_kg.5__692__AT3G29290.1.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_10_2_1; -.
DR   Proteomes; UP000008694; Unassembled WGS sequence.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 8.
DR   PANTHER; PTHR46128; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1; 1.
DR   PANTHER; PTHR46128:SF193; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR   Pfam; PF01535; PPR; 5.
DR   Pfam; PF13041; PPR_2; 3.
DR   PROSITE; PS51375; PPR; 8.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REPEAT          99..133
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          206..240
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          241..275
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          276..310
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          311..345
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          347..381
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          382..416
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          447..481
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ   SEQUENCE   498 AA;  57493 MW;  38A3F2786185BCBF CRC64;
     MKPKRRCLSV KMESFYLATP KMCFKKVSSE LDRSFNGENT VFGSELEDEH GDDRNRIHFL
     EERNEEMLSK RLLKLSRLDK VRSALELFDS MRFLGLQPNA YACNSFLSCL LRNGDVQKAF
     TVFEFMRKKE NVTGHTYSLM LKAIAEVKGC DSALRMFREL EREPKYRSYF DVVLYNTAIS
     LCGRINNVYE TERIWRVMKG DGQIGTEITY SLLVSIFVRC GRSELALDAY DEMVNYKISP
     REDAMYAMIS ACTKEEKWDL ALKIFQSMLK KGMKPNLVAC NTLINSLGKA GKVGLVFKVY
     SVAKSLGHKP DEYTWNALLT ALYKANRYED VLQLFDMIRS ENLCCLNEYL YNTAMVSCQK
     LGYWEKAVKL LYEMEGSGLT VSTSSYNLVI SACEKSRKSK VALLVYGHMA QRDCRPNTFT
     YLSLVRSCIW GSLWDEVKDI LKKVEPDVSL YNAAIHGMCL RREFKFAKEL YVKMREMGLE
     PDGKTRAMML QNLKKHQK
//
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