ID D7LNW5_ARALL Unreviewed; 498 AA.
AC D7LNW5;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 24-JAN-2024, entry version 53.
DE RecName: Full=Pentatricopeptide repeat-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=ARALYDRAFT_484700 {ECO:0000313|EMBL:EFH51766.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; GL348717; EFH51766.1; -; Genomic_DNA.
DR RefSeq; XP_002875507.1; XM_002875461.1.
DR AlphaFoldDB; D7LNW5; -.
DR STRING; 81972.D7LNW5; -.
DR EnsemblPlants; fgenesh2_kg.5__692__AT3G29290.1; fgenesh2_kg.5__692__AT3G29290.1; fgenesh2_kg.5__692__AT3G29290.1.
DR Gramene; fgenesh2_kg.5__692__AT3G29290.1; fgenesh2_kg.5__692__AT3G29290.1; fgenesh2_kg.5__692__AT3G29290.1.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_10_2_1; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 8.
DR PANTHER; PTHR46128; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1; 1.
DR PANTHER; PTHR46128:SF193; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01535; PPR; 5.
DR Pfam; PF13041; PPR_2; 3.
DR PROSITE; PS51375; PPR; 8.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 99..133
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 206..240
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 241..275
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 276..310
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 311..345
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 347..381
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 382..416
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 447..481
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 498 AA; 57493 MW; 38A3F2786185BCBF CRC64;
MKPKRRCLSV KMESFYLATP KMCFKKVSSE LDRSFNGENT VFGSELEDEH GDDRNRIHFL
EERNEEMLSK RLLKLSRLDK VRSALELFDS MRFLGLQPNA YACNSFLSCL LRNGDVQKAF
TVFEFMRKKE NVTGHTYSLM LKAIAEVKGC DSALRMFREL EREPKYRSYF DVVLYNTAIS
LCGRINNVYE TERIWRVMKG DGQIGTEITY SLLVSIFVRC GRSELALDAY DEMVNYKISP
REDAMYAMIS ACTKEEKWDL ALKIFQSMLK KGMKPNLVAC NTLINSLGKA GKVGLVFKVY
SVAKSLGHKP DEYTWNALLT ALYKANRYED VLQLFDMIRS ENLCCLNEYL YNTAMVSCQK
LGYWEKAVKL LYEMEGSGLT VSTSSYNLVI SACEKSRKSK VALLVYGHMA QRDCRPNTFT
YLSLVRSCIW GSLWDEVKDI LKKVEPDVSL YNAAIHGMCL RREFKFAKEL YVKMREMGLE
PDGKTRAMML QNLKKHQK
//