ID D7LUF3_ARALL Unreviewed; 439 AA.
AC D7LUF3;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 24-JAN-2024, entry version 49.
DE SubName: Full=Pentatricopeptide repeat-containing protein {ECO:0000313|EMBL:EFH54164.1};
GN ORFNames=ARALYDRAFT_485692 {ECO:0000313|EMBL:EFH54164.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; GL348717; EFH54164.1; -; Genomic_DNA.
DR RefSeq; XP_002877905.1; XM_002877859.1.
DR AlphaFoldDB; D7LUF3; -.
DR STRING; 81972.D7LUF3; -.
DR EnsemblPlants; fgenesh2_kg.5__1684__AT3G53170.1; fgenesh2_kg.5__1684__AT3G53170.1; fgenesh2_kg.5__1684__AT3G53170.1.
DR Gramene; fgenesh2_kg.5__1684__AT3G53170.1; fgenesh2_kg.5__1684__AT3G53170.1; fgenesh2_kg.5__1684__AT3G53170.1.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_6_1; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR GO; GO:0003729; F:mRNA binding; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR044179; PPR5-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 8.
DR PANTHER; PTHR47874; EXPRESSED PROTEIN; 1.
DR PANTHER; PTHR47874:SF6; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13041; PPR_2; 4.
DR PROSITE; PS51375; PPR; 7.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 93..127
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 164..198
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 199..233
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 259..293
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 294..328
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 329..363
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 364..398
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 439 AA; 49667 MW; 89A0FFEF2344A25E CRC64;
MCSTKVPNER TGKMNSGLIS TRHQIDPKKE LSRILRTDAA VKGIERKANS EKYLTLWPKA
VLEALDEAIK ENRWQSALKI FHLLRKQHWY EPKCKTYTKL FKVLGNCKQP DQASLLFEVM
LSEGLKPTID VYTSLIAVYG KSELLDKAFS TLEYMKSVSD CKPDVFTFTV LIRCCCKLGR
FDLVKRIILE MSYLGVGCST VTYNTIIDGY GKAGMFEEME NVLADMIEDG DSLPDVFTLN
SIIGSSEMVA HEEDGELPDI TTFNILILSF GKAGMYKKMS SVMDFMEKRF FSLTTVTYNI
VIETFGKAGK IEKMDDVFRK MKYQGVKPNS ISYCSLVNAY SKAGLVGKID SILRQIVNSD
VVLDTPFFNC IINAYGQAGD LATMKELYIQ MEERKCKPDK ITFATMIKTY KAHGIFDAVQ
ELEKQMISTG ENLDILLEK
//