ID D7M279_ARALL Unreviewed; 918 AA.
AC D7M279;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 13-SEP-2023, entry version 56.
DE RecName: Full=HTH OST-type domain-containing protein {ECO:0000259|PROSITE:PS51644};
GN ORFNames=ARALYDRAFT_487806 {ECO:0000313|EMBL:EFH47646.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
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DR EMBL; GL348718; EFH47646.1; -; Genomic_DNA.
DR RefSeq; XP_002871387.1; XM_002871341.1.
DR AlphaFoldDB; D7M279; -.
DR STRING; 81972.D7M279; -.
DR EnsemblPlants; fgenesh2_kg.6__940__AT5G09840.1; fgenesh2_kg.6__940__AT5G09840.1; fgenesh2_kg.6__940__AT5G09840.1.
DR GeneID; 9309495; -.
DR Gramene; fgenesh2_kg.6__940__AT5G09840.1; fgenesh2_kg.6__940__AT5G09840.1; fgenesh2_kg.6__940__AT5G09840.1.
DR KEGG; aly:9309495; -.
DR eggNOG; ENOG502QT74; Eukaryota.
DR HOGENOM; CLU_005322_0_0_1; -.
DR OrthoDB; 3077715at2759; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR GO; GO:0005777; C:peroxisome; IEA:InterPro.
DR GO; GO:0004540; F:RNA nuclease activity; IEA:InterPro.
DR GO; GO:0010468; P:regulation of gene expression; IEA:InterPro.
DR CDD; cd08824; LOTUS; 1.
DR CDD; cd10910; PIN_limkain_b1_N_like; 1.
DR Gene3D; 3.30.420.610; LOTUS domain-like; 2.
DR InterPro; IPR041966; LOTUS-like.
DR InterPro; IPR024768; Marf1.
DR InterPro; IPR021139; NYN.
DR InterPro; IPR025677; OST-HTH-assoc_dom.
DR InterPro; IPR025605; OST-HTH/LOTUS_dom.
DR PANTHER; PTHR14379:SF86; EMB|CAB71880.1; 1.
DR PANTHER; PTHR14379; LIMKAIN B LKAP; 1.
DR Pfam; PF01936; NYN; 1.
DR Pfam; PF14418; OHA; 1.
DR Pfam; PF12872; OST-HTH; 2.
DR PROSITE; PS51644; HTH_OST; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008694}.
FT DOMAIN 285..357
FT /note="HTH OST-type"
FT /evidence="ECO:0000259|PROSITE:PS51644"
FT DOMAIN 733..807
FT /note="HTH OST-type"
FT /evidence="ECO:0000259|PROSITE:PS51644"
FT REGION 40..67
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 362..389
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 485..530
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 671..717
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 820..918
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 40..59
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 485..516
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 681..699
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 852..866
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 883..918
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 918 AA; 101314 MW; 643D9D4AFC598A53 CRC64;
MKFGSIPSKS LLFRLSSSSA TQSPRRTTTF LVTNIHSSPF STTTGSGSNF VSGSSHSPSR
RPQQDEESRS VRVSVWWDFL SCNLPVGVNV FKVAQSITAA IRNSGIKGPI TITAFGDVLQ
LPRSNQDALS ATGISLTHVP QGGKNSADRS LITDLMCWVS QNPPPAHLLL ISSDKEFASV
LHRLRMSNYN ILLVSKSSAP GVLCSAASIM WDWDALIKGE CVSGKHFNQP PDGPYNSWYG
HYRIPLLDPF AIATNTEQSS SVKIEELSES SSESVNSNAV NLRPIPKEVV DKIRLILSLY
PKGAAITELR AELIKSNLAI DKDFYGHKKF SKFLLSMPDI LRVATANDGL FIIHAVTEKN
PPMRLDSSPG LSTAVDQKSK DKETANAPSP KLISDVELAA VRRRDGSVGK KQDNVMESDK
IVKEESSESS QEAILVGQKD VKANDKPVET SQVALVAWSD SSMEDGFFQK LKRLWYGSPE
MKSEHLPENM ESEHLPEKKS VSGSGDKYKG DKDLKSSIQG TDPMSQTSPS FVAESVEEVK
VGAAEVDSKD KDASPGFLGR LLKSFKFWGK NTASSKDCSG NQELVSVDSQ VRDIFEKESF
WNDVESFINS PRGFAIVSHS RTREVMAKNL QEEGPSCLRL LDESIMLHLV TLLISDKKWI
EETPSSSLPF RIIKGSSPGH RHPSNGLSSI FSDSSKSQSQ KQNGEKRGKN VAHAGVSVGS
MDRKQLERYK SNAIADCQKL IKKITEEHPE GYSLIRFRKD FLEEYGYHLA VDKLGYENLQ
SLIRVMHGVR IASGYILPST PSPNTKSKED DSDLTFEELG PVSDATTTHP TTKKLAVYEP
SLSEDEEDSG SERDNPEKKK QEMMSGEGKE SSLLQILDSY YTNKDGEFKK EKPEEKLVSN
GRKQKPTKTY SFVKDSEV
//