ID D7M325_ARALL Unreviewed; 655 AA.
AC D7M325;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 24-JAN-2024, entry version 62.
DE RecName: Full=Starch synthase, chloroplastic/amyloplastic {ECO:0000256|RuleBase:RU361232};
DE EC=2.4.1.- {ECO:0000256|RuleBase:RU361232};
GN ORFNames=ARALYDRAFT_489289 {ECO:0000313|EMBL:EFH48362.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=[(1->4)-alpha-D-glucosyl](n) + ADP-alpha-D-glucose = [(1->4)-
CC alpha-D-glucosyl](n+1) + ADP + H(+); Xref=Rhea:RHEA:18189, Rhea:RHEA-
CC COMP:9584, Rhea:RHEA-COMP:9587, ChEBI:CHEBI:15378, ChEBI:CHEBI:15444,
CC ChEBI:CHEBI:57498, ChEBI:CHEBI:456216; EC=2.4.1.21;
CC Evidence={ECO:0000256|ARBA:ARBA00001478};
CC -!- PATHWAY: Glycan biosynthesis; starch biosynthesis.
CC {ECO:0000256|ARBA:ARBA00004727, ECO:0000256|RuleBase:RU361232}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast
CC {ECO:0000256|RuleBase:RU361232}. Plastid, amyloplast
CC {ECO:0000256|RuleBase:RU361232}.
CC -!- SIMILARITY: Belongs to the glycosyltransferase 1 family.
CC Bacterial/plant glycogen synthase subfamily.
CC {ECO:0000256|ARBA:ARBA00010281, ECO:0000256|RuleBase:RU361232}.
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DR EMBL; GL348718; EFH48362.1; -; Genomic_DNA.
DR RefSeq; XP_002872103.1; XM_002872057.1.
DR AlphaFoldDB; D7M325; -.
DR STRING; 81972.D7M325; -.
DR EnsemblPlants; fgenesh2_kg.6__2423__AT5G24300.1; fgenesh2_kg.6__2423__AT5G24300.1; fgenesh2_kg.6__2423__AT5G24300.1.
DR Gramene; fgenesh2_kg.6__2423__AT5G24300.1; fgenesh2_kg.6__2423__AT5G24300.1; fgenesh2_kg.6__2423__AT5G24300.1.
DR eggNOG; ENOG502QTWM; Eukaryota.
DR HOGENOM; CLU_009583_18_2_1; -.
DR OrthoDB; 141134at2759; -.
DR UniPathway; UPA00152; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR GO; GO:0009501; C:amyloplast; IEA:UniProtKB-SubCell.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0004373; F:glycogen (starch) synthase activity; IEA:InterPro.
DR GO; GO:0009011; F:starch synthase activity; IEA:EnsemblPlants.
DR GO; GO:0010021; P:amylopectin biosynthetic process; IEA:EnsemblPlants.
DR GO; GO:0009960; P:endosperm development; IEA:EnsemblPlants.
DR GO; GO:0019252; P:starch biosynthetic process; IEA:UniProtKB-UniRule.
DR CDD; cd03791; GT5_Glycogen_synthase_DULL1-like; 1.
DR Gene3D; 3.40.50.2000; Glycogen Phosphorylase B; 2.
DR HAMAP; MF_00484; Glycogen_synth; 1.
DR InterPro; IPR001296; Glyco_trans_1.
DR InterPro; IPR011835; GS/SS.
DR InterPro; IPR013534; Starch_synth_cat_dom.
DR NCBIfam; TIGR02095; glgA; 1.
DR PANTHER; PTHR45825; GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC; 1.
DR PANTHER; PTHR45825:SF11; STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC; 1.
DR Pfam; PF08323; Glyco_transf_5; 1.
DR Pfam; PF00534; Glycos_transf_1; 1.
DR SUPFAM; SSF53756; UDP-Glycosyltransferase/glycogen phosphorylase; 1.
PE 3: Inferred from homology;
KW Amyloplast {ECO:0000256|ARBA:ARBA00023234, ECO:0000256|RuleBase:RU361232};
KW Chloroplast {ECO:0000256|RuleBase:RU361232};
KW Glycosyltransferase {ECO:0000256|ARBA:ARBA00022676,
KW ECO:0000256|RuleBase:RU361232};
KW Plastid {ECO:0000256|ARBA:ARBA00023234, ECO:0000256|RuleBase:RU361232};
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Starch biosynthesis {ECO:0000256|ARBA:ARBA00022922,
KW ECO:0000256|RuleBase:RU361232};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 147..404
FT /note="Starch synthase catalytic"
FT /evidence="ECO:0000259|Pfam:PF08323"
FT DOMAIN 459..608
FT /note="Glycosyl transferase family 1"
FT /evidence="ECO:0000259|Pfam:PF00534"
SQ SEQUENCE 655 AA; 72228 MW; 5F9988D5AD244CEF CRC64;
MASLQISGSV KFEPLVGFNR IRYFRPIGSL GIPRFRRRFS IGRPLLLRRS SSFSGDKIGE
SVGDEKGFIT DAERDGSGSV LGFQLTPTGD QEIFSTSTGE ITHQEEKKEA IDETVMADFG
VPGNRAVEEG AVEVGIPSGK AEVVNNLVFV TSEAAPYSKT GGLGDVCGSL PIALAGRGHR
VMVVSPRYLN GTAADNNYAR AKDLGIRITV NCFGGSQEVS FYHEYRDGVD WVFVDHKSYH
RPGNPYGDSK GAFGDNQFRF TLLCHAACEA PLVLPLGGFT YGEKSLFLVN DWHAGLVPIL
LAAKYRPYGV YKDARSILII HNLAHQGVEP AATYTNLGLP SEWYGAVGWV FPTWARTHAL
DTGEAVNVLK GAIVTSDRII TVSQGYAWEI TTVEGGYGLQ DLLSSRKSVI NGITNGINVD
EWNPSTDEHI PFHYSADDFS EKVKCKMALQ KELGLPIRPE CPMIGFIGRL DYQKGIDLIQ
TAGPDLMVDD IQFVMLGSGD PKYESWMRSM EETYRDKFRG WVGFNVPISH RITAGCDILL
MPSRFEPCGL NQLYAMRYGT IPVVHGTGGL RDTVENFNPY AEGGAGAGTG WVFTPLSKDS
MVSALRLAAA TYREYKESWE GLMRRGMTRN YSWENAAVQY EQVFQWVFMD PPYVS
//