ID D7M846_ARALL Unreviewed; 533 AA.
AC D7M846;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE SubName: Full=Pentatricopeptide repeat-containing protein {ECO:0000313|EMBL:EFH47976.1};
GN ORFNames=ARALYDRAFT_488495 {ECO:0000313|EMBL:EFH47976.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; GL348718; EFH47976.1; -; Genomic_DNA.
DR RefSeq; XP_002871717.1; XM_002871671.1.
DR AlphaFoldDB; D7M846; -.
DR EnsemblPlants; fgenesh2_kg.6__1629__AT5G16420.1; fgenesh2_kg.6__1629__AT5G16420.1; fgenesh2_kg.6__1629__AT5G16420.1.
DR GeneID; 9309844; -.
DR Gramene; fgenesh2_kg.6__1629__AT5G16420.1; fgenesh2_kg.6__1629__AT5G16420.1; fgenesh2_kg.6__1629__AT5G16420.1.
DR KEGG; aly:9309844; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_12_1; -.
DR OrthoDB; 411181at2759; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 8.
DR PANTHER; PTHR47936; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47936:SF5; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF12854; PPR_1; 3.
DR Pfam; PF13041; PPR_2; 2.
DR PROSITE; PS51375; PPR; 7.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 188..222
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 223..257
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 258..292
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 293..327
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 328..362
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 397..431
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 432..466
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 533 AA; 60670 MW; EB84FB775900B71B CRC64;
MFLPRVNGTR FRPLIASRRL FSASAASLQQ YCTEKPTIKP WPQRLFPKRL VSMITQQQNI
DLALQIFLYA GKSHPGFTHN YDTYHSILFK LSRARAFDPV ESLMADLRNS YPPIKCGENL
FIDLLRNYGL AGRYESSMRI FLRIPDFGVK RSVRSLNTLL NVLIQNQRFD LVHAMFKNSK
ESFGITPNIF TCNLLVKALC KKNDIESAYK VLDEIPAMGL VPNLVTYTTI LGGYVARGDM
ESAKRVLEEM LDRGWYPDAI TYTVLMDGYC KLGRFSEAAT VMDDMEKNEI EPNEVTYGVM
IRALCKEKKS GEARNMFDEM LDRSFMPDSS LCCKVIDALC EDHKVDEACG LWRKMLKNNC
MPDNALLSTL IHWLCKEGRV SEARKLFDEF DKGSIPSLLT YNTLIAGMCE KGELTEAGRL
WDDMFERKCK PNAFTYNVLI EGLSKNGNVK EGVRVLEEML ESGCFPNKTT FLILFEGLQK
LGKEEDAIKI VSMAVMNGKV DKESWELFLN KFVGELDKGV LALKELLHEI SVS
//
