ID D7MIM6_ARALL Unreviewed; 610 AA.
AC D7MIM6;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 72.
DE SubName: Full=AT5g42080/MJC20_19 {ECO:0000313|EMBL:EFH44820.1};
GN ORFNames=ARALYDRAFT_493775 {ECO:0000313|EMBL:EFH44820.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
CC -!- SIMILARITY: Belongs to the TRAFAC class dynamin-like GTPase
CC superfamily. Dynamin/Fzo/YdjA family. {ECO:0000256|RuleBase:RU003932}.
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DR EMBL; GL348719; EFH44820.1; -; Genomic_DNA.
DR RefSeq; XP_002868561.1; XM_002868515.1.
DR AlphaFoldDB; D7MIM6; -.
DR STRING; 81972.D7MIM6; -.
DR EnsemblPlants; fgenesh2_kg.7__3208__AT5G42080.1; fgenesh2_kg.7__3208__AT5G42080.1; fgenesh2_kg.7__3208__AT5G42080.1.
DR Gramene; fgenesh2_kg.7__3208__AT5G42080.1; fgenesh2_kg.7__3208__AT5G42080.1; fgenesh2_kg.7__3208__AT5G42080.1.
DR eggNOG; KOG0446; Eukaryota.
DR HOGENOM; CLU_008964_5_3_1; -.
DR OrthoDB; 1052588at2759; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR GO; GO:0005938; C:cell cortex; IEA:EnsemblPlants.
DR GO; GO:0009504; C:cell plate; IEA:EnsemblPlants.
DR GO; GO:0009535; C:chloroplast thylakoid membrane; IEA:EnsemblPlants.
DR GO; GO:0045334; C:clathrin-coated endocytic vesicle; IEA:EnsemblPlants.
DR GO; GO:0005874; C:microtubule; IEA:EnsemblPlants.
DR GO; GO:0009524; C:phragmoplast; IEA:EnsemblPlants.
DR GO; GO:0005886; C:plasma membrane; IEA:EnsemblPlants.
DR GO; GO:0030276; F:clathrin binding; IEA:EnsemblPlants.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:EnsemblPlants.
DR GO; GO:0043424; F:protein histidine kinase binding; IEA:EnsemblPlants.
DR GO; GO:0009920; P:cell plate formation involved in plant-type cell wall biogenesis; IEA:EnsemblPlants.
DR GO; GO:0080029; P:cellular response to boron-containing substance levels; IEA:EnsemblPlants.
DR GO; GO:0072583; P:clathrin-dependent endocytosis; IEA:EnsemblPlants.
DR GO; GO:0009793; P:embryo development ending in seed dormancy; IEA:EnsemblPlants.
DR GO; GO:0006886; P:intracellular protein transport; IEA:EnsemblPlants.
DR GO; GO:0030100; P:regulation of endocytosis; IEA:EnsemblPlants.
DR GO; GO:2000114; P:regulation of establishment of cell polarity; IEA:EnsemblPlants.
DR GO; GO:1905952; P:regulation of lipid localization; IEA:EnsemblPlants.
DR GO; GO:2000694; P:regulation of phragmoplast microtubule organization; IEA:EnsemblPlants.
DR GO; GO:0080157; P:regulation of plant-type cell wall organization or biogenesis; IEA:EnsemblPlants.
DR GO; GO:0048766; P:root hair initiation; IEA:EnsemblPlants.
DR GO; GO:0048480; P:stigma development; IEA:EnsemblPlants.
DR GO; GO:0010091; P:trichome branching; IEA:EnsemblPlants.
DR GO; GO:0010051; P:xylem and phloem pattern formation; IEA:EnsemblPlants.
DR CDD; cd08771; DLP_1; 1.
DR Gene3D; 1.20.120.1240; Dynamin, middle domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR022812; Dynamin.
DR InterPro; IPR001401; Dynamin_GTPase.
DR InterPro; IPR019762; Dynamin_GTPase_CS.
DR InterPro; IPR045063; Dynamin_N.
DR InterPro; IPR000375; Dynamin_stalk.
DR InterPro; IPR030381; G_DYNAMIN_dom.
DR InterPro; IPR003130; GED.
DR InterPro; IPR020850; GED_dom.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR11566; DYNAMIN; 1.
DR PANTHER; PTHR11566:SF159; PHRAGMOPLASTIN DRP1A; 1.
DR Pfam; PF01031; Dynamin_M; 1.
DR Pfam; PF00350; Dynamin_N; 1.
DR Pfam; PF02212; GED; 1.
DR PRINTS; PR00195; DYNAMIN.
DR SMART; SM00053; DYNc; 1.
DR SMART; SM00302; GED; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00410; G_DYNAMIN_1; 1.
DR PROSITE; PS51718; G_DYNAMIN_2; 1.
DR PROSITE; PS51388; GED; 1.
PE 3: Inferred from homology;
KW GTP-binding {ECO:0000256|RuleBase:RU003932};
KW Nucleotide-binding {ECO:0000256|RuleBase:RU003932};
KW Reference proteome {ECO:0000313|Proteomes:UP000008694}.
FT DOMAIN 31..300
FT /note="Dynamin-type G"
FT /evidence="ECO:0000259|PROSITE:PS51718"
FT DOMAIN 518..610
FT /note="GED"
FT /evidence="ECO:0000259|PROSITE:PS51388"
SQ SEQUENCE 610 AA; 68192 MW; 4D20E99E19E4B0E4 CRC64;
MENLISLVNK IQRACTALGD HGDSSALPTL WDSLPAIAVV GGQSSGKSSV LESIVGKDFL
PRGSGIVTRR PLVLQLQKID DGTREYAEFL HLPRKRFTDF AAVRKEIQDE TDRETGRSKA
ISSVPIHLSI YSPNVVNLTL IDLPGLTKVA VDGQSDSIVK DIENMVRSYI EKPNCIILAI
SPANQDLATS DAIKISREVD PSGERTFGVL TKIDLMDKGT DAVEILEGRS FKLKYPWVGV
VNRSQADINK NVDMIAARKR EREYFSNTTE YRHLAHKMGS EHLAKMLSKH LEHVIKSRIP
GIQSLINKTV SELETELSRL GKPIAADAGG KLYSIMEICR LFDQIFKEHL DGVRAGGEKV
YNVFDNQLPA ALKRLQFDKQ LAMDNIRKLV TEADGYQPHL IAPEQGYRRL IESSIVSIRG
PAEASVDTVH AILKDLVHKS VNETVELKQY PALRVEVTNA AIESLDKMRE GSKKATLQLV
DMECSYLTVD FFRKLPQDVE KGGNPTHSIF DRYNDSYLRR IGSNVLSYVN MVCAGLRNSI
PKSIVYCQVR EAKRSLLDHF FAELGTMDMK RLSSLLNEDP AIMERRSAIS KRLELYRAAQ
SEIDAVAWSK
//
