ID D7PQR2_9GENT Unreviewed; 476 AA.
AC D7PQR2;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE SubName: Full=Phytochrome A {ECO:0000313|EMBL:ADI45801.1};
DE Flags: Fragment;
GN Name=phya {ECO:0000313|EMBL:ADI45801.1};
OS Thyrsanthella difformis.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Gentianales; Apocynaceae; Apocynoideae; Odontadenieae;
OC Thyrsanthella.
OX NCBI_TaxID=429297 {ECO:0000313|EMBL:ADI45801.1};
RN [1] {ECO:0000313|EMBL:ADI45801.1}
RP NUCLEOTIDE SEQUENCE.
RA Livshultz T.;
RT "The phylogenetic position of milkweeds (Apocynaceae subfamilies
RT Secamonoideae and Asclepiadoideae): Evidence from the nucleus and
RT chloroplast.";
RL Taxon 59:0-0(2010).
CC -!- SIMILARITY: Belongs to the phytochrome family.
CC {ECO:0000256|ARBA:ARBA00008235}.
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DR EMBL; GU901398; ADI45801.1; -; Genomic_DNA.
DR AlphaFoldDB; D7PQR2; -.
DR GO; GO:0009881; F:photoreceptor activity; IEA:UniProtKB-KW.
DR GO; GO:0009584; P:detection of visible light; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.450.270; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 2.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013767; PAS_fold.
DR InterPro; IPR016132; Phyto_chromo_attachment.
DR InterPro; IPR013516; Phyto_chromo_BS.
DR InterPro; IPR001294; Phytochrome.
DR InterPro; IPR013515; Phytochrome_cen-reg.
DR InterPro; IPR043150; Phytochrome_PHY_sf.
DR PANTHER; PTHR47876; OS08G0260000 PROTEIN; 1.
DR PANTHER; PTHR47876:SF3; PHYTOCHROME 1; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF00989; PAS; 1.
DR Pfam; PF00360; PHY; 1.
DR PRINTS; PR01033; PHYTOCHROME.
DR SMART; SM00065; GAF; 1.
DR SUPFAM; SSF55781; GAF domain-like; 2.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50112; PAS; 1.
DR PROSITE; PS00245; PHYTOCHROME_1; 1.
DR PROSITE; PS50046; PHYTOCHROME_2; 1.
PE 3: Inferred from homology;
KW Chromophore {ECO:0000256|ARBA:ARBA00022991};
KW Photoreceptor protein {ECO:0000256|ARBA:ARBA00022543};
KW Receptor {ECO:0000256|ARBA:ARBA00023170};
KW Sensory transduction {ECO:0000256|ARBA:ARBA00022606};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 20..193
FT /note="Phytochrome chromophore attachment site"
FT /evidence="ECO:0000259|PROSITE:PS50046"
FT DOMAIN 419..476
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:ADI45801.1"
FT NON_TER 476
FT /evidence="ECO:0000313|EMBL:ADI45801.1"
SQ SEQUENCE 476 AA; 53480 MW; D6FFC9DEF133BE54 CRC64;
QSYKLAAKAI ARLQSLPSGS VERLCDTMVQ EVFELTGYDR VMTYKFHEDD HGEVISEITK
PGLEPYLGLH YPATDIPQAA RFLFMKNKVR MICDCRAKHV KVLQDEKLSF DLTLCGSTLR
APHSCHLQYM ENMNSIASLV MAVVINDGDD EGESSDSAQP QKRKRLWGLV VCHNTTPRFV
PFPLRYACEF LAQVFAIHVN KELELENQIV EKNILKTQTL LCDMLMRDAP LGIVSQSPNI
MDLVKCDGAA LLYKNKIHRV GVTPNDFQLN DIVSWLIEYH MDSTGLSTDS LYDAGFPGAL
ALGDTICGMA AVRISDKDWL FWFRSHTAAE IRWGGAKHEP GEKDDGRKMH PRSSFKAFLE
VVKTRSLPWK DYEMDAIHSL QLILRNSFKE VDGSESETKK IHNKLNDLRI DGFQELEAVT
AEMVRLIETA SVPILAVDTD GLVNGWNTKI AELTGLPVDE AIGKHLLTLV EDLSAE
//
