ID D7PQR8_9GENT Unreviewed; 476 AA.
AC D7PQR8;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE SubName: Full=Phytochrome A {ECO:0000313|EMBL:ADI45807.1};
DE Flags: Fragment;
GN Name=phya {ECO:0000313|EMBL:ADI45807.1};
OS Zygostelma benthamii.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Gentianales; Apocynaceae; Periplocoideae; Zygostelma.
OX NCBI_TaxID=429307 {ECO:0000313|EMBL:ADI45807.1};
RN [1] {ECO:0000313|EMBL:ADI45807.1}
RP NUCLEOTIDE SEQUENCE.
RA Livshultz T.;
RT "The phylogenetic position of milkweeds (Apocynaceae subfamilies
RT Secamonoideae and Asclepiadoideae): Evidence from the nucleus and
RT chloroplast.";
RL Taxon 59:0-0(2010).
CC -!- SIMILARITY: Belongs to the phytochrome family.
CC {ECO:0000256|ARBA:ARBA00008235}.
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DR EMBL; GU901404; ADI45807.1; -; Genomic_DNA.
DR AlphaFoldDB; D7PQR8; -.
DR GO; GO:0009881; F:photoreceptor activity; IEA:UniProtKB-KW.
DR GO; GO:0009584; P:detection of visible light; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.450.270; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 2.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013767; PAS_fold.
DR InterPro; IPR016132; Phyto_chromo_attachment.
DR InterPro; IPR013516; Phyto_chromo_BS.
DR InterPro; IPR001294; Phytochrome.
DR InterPro; IPR013515; Phytochrome_cen-reg.
DR InterPro; IPR043150; Phytochrome_PHY_sf.
DR PANTHER; PTHR47876; OS08G0260000 PROTEIN; 1.
DR PANTHER; PTHR47876:SF3; PHYTOCHROME 1; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF00989; PAS; 1.
DR Pfam; PF00360; PHY; 1.
DR PRINTS; PR01033; PHYTOCHROME.
DR SMART; SM00065; GAF; 1.
DR SUPFAM; SSF55781; GAF domain-like; 2.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50112; PAS; 1.
DR PROSITE; PS00245; PHYTOCHROME_1; 1.
DR PROSITE; PS50046; PHYTOCHROME_2; 1.
PE 3: Inferred from homology;
KW Chromophore {ECO:0000256|ARBA:ARBA00022991};
KW Photoreceptor protein {ECO:0000256|ARBA:ARBA00022543};
KW Receptor {ECO:0000256|ARBA:ARBA00023170};
KW Sensory transduction {ECO:0000256|ARBA:ARBA00022606};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 20..193
FT /note="Phytochrome chromophore attachment site"
FT /evidence="ECO:0000259|PROSITE:PS50046"
FT DOMAIN 419..476
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:ADI45807.1"
FT NON_TER 476
FT /evidence="ECO:0000313|EMBL:ADI45807.1"
SQ SEQUENCE 476 AA; 53343 MW; 00A2A216017F5570 CRC64;
QSYKLAAKAI TRLQSLPSGS TERLCDTMVQ EVFELTGYDR VMTYKFHEDD LGEVISEITK
PGLEPYLGLH YPATDIPQAA RFLFMKNKVR MICDCHAKHV KVLQDEKLSF DLTLCGSTLR
APHSCHSQYM ENMNSIASLV MAVVINDGDD EGDSSDSAQP QKRKRLWGLV VCHNATPRFV
PFPLRYACEF LAQAFAIHIN KELELENQII EKNILKTQTL LCDMLMRDAP LGIVSQNPNI
MDLVKCDGAA LLYKNKIHLM GKSPSNSQLN DIVSWLIEYH MDSTGLSTDS LYDAGFPGAL
ALGDAVCGMA AVRISEKDWL FWFRSHTAAD IRWGGAKHEL GEKDDGRKMH PRSSFKAFLE
VVKTRSLPWK DYEMDAIHSL QLILRNSFKE VEAPEFETRT IHTKLNGLRI DGFQELEAVT
AEMVRLIETA SVPILAVDVD GLVNGWNTKI AELTGLPVDE AIGKHLLTLV EDSSTQ
//
