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Database: UniProt
Entry: D7RIC7_MEDTR
LinkDB: D7RIC7_MEDTR
Original site: D7RIC7_MEDTR 
ID   D7RIC7_MEDTR            Unreviewed;       672 AA.
AC   D7RIC7;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   27-SEP-2017, entry version 45.
DE   SubName: Full=Alpha-L-arabinofuranosidase {ECO:0000313|EMBL:ADH83380.1};
GN   Name=Araf1 {ECO:0000313|EMBL:ADH83380.1};
GN   Synonyms=11413291 {ECO:0000313|EnsemblPlants:AES81079};
GN   OrderedLocusNames=MTR_7g088410 {ECO:0000313|EMBL:AES81079.1};
OS   Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae;
OC   Trifolieae; Medicago.
OX   NCBI_TaxID=3880 {ECO:0000313|EMBL:ADH83380.1};
RN   [1] {ECO:0000313|EMBL:ADH83380.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Young roots {ECO:0000313|EMBL:ADH83380.1};
RA   Xiong J.S., Xie Z.P., Staehelin C.;
RT   "Molecular cloning and characterization of an alpha-L-
RT   arabinofuranosidase of Medicago truncatula.";
RL   Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:AES81079.1, ECO:0000313|EnsemblPlants:AES81079, ECO:0000313|Proteomes:UP000002051}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=A17 {ECO:0000313|EMBL:AES81079.1}, and cv. Jemalong A17
RC   {ECO:0000313|EnsemblPlants:AES81079,
RC   ECO:0000313|Proteomes:UP000002051};
RX   PubMed=22089132; DOI=10.1038/nature10625;
RA   Young N.D., Debelle F., Oldroyd G.E.D., Geurts R., Cannon S.B.,
RA   Udvardi M.K., Benedito V.A., Mayer K.F.X., Gouzy J., Schoof H.,
RA   Van de Peer Y., Proost S., Cook D.R., Meyers B.C., Spannagl M.,
RA   Cheung F., De Mita S., Krishnakumar V., Gundlach H., Zhou S.,
RA   Mudge J., Bharti A.K., Murray J.D., Naoumkina M.A., Rosen B.,
RA   Silverstein K.A.T., Tang H., Rombauts S., Zhao P.X., Zhou P.,
RA   Barbe V., Bardou P., Bechner M., Bellec A., Berger A., Berges H.,
RA   Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA   Deshpande S., Dai X., Doyle J.J., Dudez A.-M., Farmer A.D.,
RA   Fouteau S., Franken C., Gibelin C., Gish J., Goldstein S.,
RA   Gonzalez A.J., Green P.J., Hallab A., Hartog M., Hua A.,
RA   Humphray S.J., Jeong D.-H., Jing Y., Jocker A., Kenton S.M.,
RA   Kim D.-J., Klee K., Lai H., Lang C., Lin S., Macmil S.L.,
RA   Magdelenat G., Matthews L., McCorrison J., Monaghan E.L., Mun J.-H.,
RA   Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA   Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C.,
RA   Sallet E., Samain S., Samson N., Sanders I., Saurat O., Scarpelli C.,
RA   Schiex T., Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S.,
RA   Singer S.R., Sinharoy S., Sterck L., Viollet A., Wang B.-B., Wang K.,
RA   Wang M., Wang X., Warfsmann J., Weissenbach J., White D.D.,
RA   White J.D., Wiley G.B., Wincker P., Xing Y., Yang L., Yao Z., Ying F.,
RA   Zhai J., Zhou L., Zuber A., Denarie J., Dixon R.A., May G.D.,
RA   Schwartz D.C., Rogers J., Quetier F., Town C.D., Roe B.A.;
RT   "The Medicago genome provides insight into the evolution of rhizobial
RT   symbioses.";
RL   Nature 480:520-524(2011).
RN   [3] {ECO:0000313|EMBL:AES81079.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=A17;
RX   PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA   Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA   Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA   Schwartz D.C., Town C.D.;
RT   "An improved genome release (version Mt4.0) for the model legume
RT   Medicago truncatula.";
RL   BMC Genomics 15:312-312(2014).
RN   [4] {ECO:0000313|EnsemblPlants:AES81079}
RP   IDENTIFICATION.
RC   STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AES81079};
RG   EnsemblPlants;
RL   Submitted (APR-2015) to UniProtKB.
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DR   EMBL; HM066996; ADH83380.1; -; mRNA.
DR   EMBL; CM001223; AES81079.1; -; Genomic_DNA.
DR   RefSeq; XP_003624861.1; XM_003624813.2.
DR   UniGene; Mtr.4458; -.
DR   CAZy; GH51; Glycoside Hydrolase Family 51.
DR   EnsemblPlants; AES81079; AES81079; MTR_7g088410.
DR   GeneID; 11413291; -.
DR   Gramene; AES81079; AES81079; MTR_7g088410.
DR   KEGG; mtr:MTR_7g088410; -.
DR   KO; K01209; -.
DR   OMA; RFPGGNM; -.
DR   OrthoDB; EOG09360475; -.
DR   Proteomes; UP000002051; Chromosome 7.
DR   GO; GO:0046556; F:alpha-L-arabinofuranosidase activity; IEA:InterPro.
DR   GO; GO:0046373; P:L-arabinose metabolic process; IEA:InterPro.
DR   Gene3D; 2.60.120.260; -; 1.
DR   InterPro; IPR010720; Alpha-L-AF_C.
DR   InterPro; IPR003305; CenC_carb-bd.
DR   InterPro; IPR008979; Galactose-bd-like.
DR   InterPro; IPR017853; Glycoside_hydrolase_SF.
DR   Pfam; PF06964; Alpha-L-AF_C; 1.
DR   Pfam; PF02018; CBM_4_9; 1.
DR   SMART; SM00813; Alpha-L-AF_C; 1.
DR   SUPFAM; SSF49785; SSF49785; 1.
DR   SUPFAM; SSF51445; SSF51445; 1.
PE   2: Evidence at transcript level;
KW   Complete proteome {ECO:0000313|Proteomes:UP000002051};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002051};
KW   Signal {ECO:0000256|SAM:SignalP}.
FT   SIGNAL        1     32       {ECO:0000256|SAM:SignalP}.
FT   CHAIN        33    672       {ECO:0000256|SAM:SignalP}.
FT                                /FTId=PRO_5010961822.
FT   DOMAIN      458    646       Alpha-L-AF_C. {ECO:0000259|SMART:
FT                                SM00813}.
SQ   SEQUENCE   672 AA;  74010 MW;  D7525FE45FB1C508 CRC64;
     MGFSKDSCCV FMLQLLIVVY LVVQCFDVQV QADLNATLVV DASQASGRRI PETLFGIFFE
     EINHAGAGGL WAELVSNRGF EAGGPNIPSN IDPWSIIGNA TYINVETDRT SCFERNKVAL
     RLEVLCDGTC PTDGVGVYNP GFWGMNIEQG KKYKVVFYAR STGPLNLKVS LTGSNGVGSL
     ASTVITGSAS DFSNWTKVET VLEAKATNPN SRLQLTTTTK GVIWLDQVSA MPLDTYKGHG
     FRSDLLQMLV DLKPSFIRFP GGCFVEGDYL RNAFRWKAAV GPWEERPGHF GDVWKYWTDD
     GLGYYEFLQL SEDLGALPIW VFNNGVSHND EVDTSAVLPF VQEALDGLEF ARGDPTSKWG
     SMRAAMGHPE PFNLKYVAVG NEDCGKKNYR GNYLRFYDAI RRAYPDIQII SNCDGSSRPL
     DHPADMYDYH IYTNANDMFS RSTTFNRVTR SGPKAFVSEY AVTGNDAGQG SLLAALAEAG
     FLIGLEKNSD IVHMASYAPL FVNANDRRWN PDAIVFNSFQ LYGTPSYWMQ LFFSESNGAT
     LLNSSLQTTA SNSLVASAIT WQNSVDKKNY IRIKAVNFGT SAVNLKISFN GLDPNSLQSS
     GSTKTVLTST NLMDENSFSQ PKKVIPIQSL LQSVGKDMNV IVPPHSFTSF DLLKESSNLK
     MLESDSSSWS SI
//
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