ID D7T2X0_VITVI Unreviewed; 1445 AA.
AC D7T2X0;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 83.
DE RecName: Full=Clustered mitochondria protein homolog {ECO:0000256|HAMAP-Rule:MF_03013};
GN OrderedLocusNames=VIT_13s0064g01350 {ECO:0000313|EMBL:CBI24851.3};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CBI24851.3, ECO:0000313|Proteomes:UP000009183};
RN [1] {ECO:0000313|Proteomes:UP000009183}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pinot noir / PN40024 {ECO:0000313|Proteomes:UP000009183};
RX PubMed=17721507; DOI=10.1038/nature06148;
RG The French-Italian Public Consortium for Grapevine Genome Characterization.;
RA Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A.,
RA Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F.,
RA Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.,
RA Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E.,
RA Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M.,
RA Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M.,
RA Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E.,
RA Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M.,
RA Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G.,
RA Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F.,
RA Wincker P.;
RT "The grapevine genome sequence suggests ancestral hexaploidization in major
RT angiosperm phyla.";
RL Nature 449:463-467(2007).
CC -!- FUNCTION: mRNA-binding protein involved in proper cytoplasmic
CC distribution of mitochondria. {ECO:0000256|HAMAP-Rule:MF_03013}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_03013}.
CC -!- SIMILARITY: Belongs to the CLU family. {ECO:0000256|HAMAP-
CC Rule:MF_03013}.
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DR EMBL; FN595509; CBI24851.3; -; Genomic_DNA.
DR RefSeq; XP_010659324.1; XM_010661022.2.
DR STRING; 29760.D7T2X0; -.
DR PaxDb; 29760-VIT_13s0064g01350-t01; -.
DR EnsemblPlants; Vitvi13g01769_t001; Vitvi13g01769_P001; Vitvi13g01769.
DR GeneID; 100264871; -.
DR Gramene; Vitvi13g01769_t001; Vitvi13g01769_P001; Vitvi13g01769.
DR KEGG; vvi:100264871; -.
DR eggNOG; KOG1839; Eukaryota.
DR HOGENOM; CLU_003256_0_0_1; -.
DR InParanoid; D7T2X0; -.
DR OMA; HPVWDKD; -.
DR OrthoDB; 927222at2759; -.
DR Proteomes; UP000009183; Chromosome 13.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0007005; P:mitochondrion organization; IEA:UniProtKB-UniRule.
DR GO; GO:0051640; P:organelle localization; IEA:UniProt.
DR CDD; cd15466; CLU-central; 1.
DR Gene3D; 3.30.2280.10; Hypothetical protein (hspc210); 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR HAMAP; MF_03013; CLU; 1.
DR InterPro; IPR033646; CLU-central.
DR InterPro; IPR025697; CLU_dom.
DR InterPro; IPR028275; CLU_N.
DR InterPro; IPR027523; CLU_prot.
DR InterPro; IPR007967; GSKIP_dom.
DR InterPro; IPR023231; GSKIP_dom_sf.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR12601:SF6; CLUSTERED MITOCHONDRIA PROTEIN HOMOLOG; 1.
DR PANTHER; PTHR12601; EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3; 1.
DR Pfam; PF13236; CLU; 1.
DR Pfam; PF15044; CLU_N; 1.
DR Pfam; PF12807; eIF3_p135; 1.
DR Pfam; PF05303; GSKIP_dom; 1.
DR Pfam; PF13424; TPR_12; 2.
DR SMART; SM00028; TPR; 3.
DR SUPFAM; SSF103107; Hypothetical protein c14orf129, hspc210; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51823; CLU; 1.
DR PROSITE; PS50005; TPR; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490, ECO:0000256|HAMAP-Rule:MF_03013};
KW Reference proteome {ECO:0000313|Proteomes:UP000009183};
KW RNA-binding {ECO:0000256|HAMAP-Rule:MF_03013};
KW TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT DOMAIN 357..670
FT /note="Clu"
FT /evidence="ECO:0000259|PROSITE:PS51823"
FT REPEAT 1152..1185
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REGION 1..79
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 469..509
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 699..735
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 903..930
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1375..1445
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 12..63
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 476..509
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 714..734
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1396..1416
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1445 AA; 157281 MW; DCE2E810665B20D0 CRC64;
MAGKSNKGRN RRGSHSATNS SEPVGSSDSQ MKDNVTASGS NQAEANGVMA TAESNSTNSE
VKESETANTK DGSKQGEINL YPVSVKTQGG EKLELQLNPG DSVMDVRQFL LDAPETCFFT
CYDLLLHTKD GSVHHLEDYN EISEVADITT GDCSLEMVAA LYDDRSIRAH VNRARELLSL
SSLHASLSTS LALQHETSQT TASSSGDPVK TEVPELDGLG FMDNVAGSLS NLLSSHSKEI
KCVESIVFSS FNPPPSNRRL VGDLIYLDVV TLEGNKFCIT GTTKVFYVNS STGNTLDPRL
SKSTFEATTL IGLLQKISSK FKKAFREILE RKASAHPFEN VQSLLPPSSW LGLYPVPDHI
RDAARAEEAL TLSYGSELIG MQRDWNEELQ SCREFPHTSP QERILRDRAL YKVTSDFVDA
AISGAIGVIS RCIPPINPTD PECFHMYVHN NIFFSFAVDA DLDQLSKKRA SDPISKVESR
NLSHNSSEKA SNDLLHGTSG TSNGENCDGS MKLELNGVQE LAPDVSSETQ SIDSEQATYA
SANNDLKGTK AYQEADVPGL YNLAMAIIDY RGHRVVAQSV LPGILQGDKS DSLLYGSVDN
GKKICWNEDF HSKVLEAAKH LHLKEHTVRD GSGNVFKLAA PVECKGIVGS DDRHYLLDLM
RVTPRDANYT GPGSRFCILR PELITAFCQA EVAERLKRKT KSGGEVHVAS DSPKASSVDE
QVRTDANDAV ASDSQDLTIE GKIEAAPDSA SAHAESTESC EEMFFNPNVF TEFKLAGSPE
EIAADEENVR KASSHLTDVV LPKFIQDLCT LEVSPMDGQT LTEALHAHGI NVRYIGKVAD
RTKHLPHLWE LCSNEIVVRS AKHILKDVLR NTEDHDIGPA ISHFFNCFFG SYQAVGVKAT
ANSTQARTSK KDHAGHHTSS RSSKAQAKWK AGASARKNQS SYMNVSSDSL WLDILEFAKL
KYEFELPEDA RARVKKVSVI RNLCQKVGIT IAARKYDLDS ASPFQTADIL NLQPVVKHSV
PVCSEAKDLV ETGKVQLAEG MLTEAYTLFS EAFSILQQVT GPMHREVANC CRYLAMVLYH
AGDMAGAIMQ QHKELIINER CLGLDHPDTA HSYGNMALFY HGLNQTELAL RHMSRALLLL
SLSSGPDHPD VAATFINVAM MYQDIGKMNT ALRYLQEALK KNERLLGEEH IQTAVCYHAL
AIAFNCMGAF KLSHQHEKKT YEILVKQLGE EDSRTRDSQN WMKTFKMREI QLNAQKQKGQ
ALNAASAQKA IDILKSNPDL MHAFQAAAAA GGSGSSGASA SKSLNAAVIG DAVPRGRGID
ERAARAAAEV RKKAAARGLL IRPHGVPVQA FPPLTQLLNI INSGMTPDAV DNDEAEAAKK
EANGHQGNEP ADSKNEPPPK SGKEPADAKS EQPKSGKDDQ APVGLGKGLA SLDGKKQKTK
PKVAA
//
