ID D7T6T2_VITVI Unreviewed; 486 AA.
AC D7T6T2;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 64.
DE RecName: Full=DEAD-box ATP-dependent RNA helicase 58, chloroplastic {ECO:0008006|Google:ProtNLM};
GN OrderedLocusNames=VIT_05s0020g02870 {ECO:0000313|EMBL:CBI26203.3};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CBI26203.3, ECO:0000313|Proteomes:UP000009183};
RN [1] {ECO:0000313|Proteomes:UP000009183}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pinot noir / PN40024 {ECO:0000313|Proteomes:UP000009183};
RX PubMed=17721507; DOI=10.1038/nature06148;
RG The French-Italian Public Consortium for Grapevine Genome Characterization.;
RA Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A.,
RA Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F.,
RA Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.,
RA Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E.,
RA Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M.,
RA Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M.,
RA Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E.,
RA Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M.,
RA Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G.,
RA Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F.,
RA Wincker P.;
RT "The grapevine genome sequence suggests ancestral hexaploidization in major
RT angiosperm phyla.";
RL Nature 449:463-467(2007).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC Evidence={ECO:0000256|ARBA:ARBA00001556};
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DR EMBL; FN595749; CBI26203.3; -; Genomic_DNA.
DR AlphaFoldDB; D7T6T2; -.
DR STRING; 29760.D7T6T2; -.
DR PaxDb; 29760-VIT_05s0020g02870-t01; -.
DR eggNOG; KOG0327; Eukaryota.
DR HOGENOM; CLU_003041_2_1_1; -.
DR InParanoid; D7T6T2; -.
DR OMA; RRFLHDC; -.
DR Proteomes; UP000009183; Chromosome 5.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0003724; F:RNA helicase activity; IBA:GO_Central.
DR CDD; cd00268; DEADc; 1.
DR CDD; cd18787; SF2_C_DEAD; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR47963:SF10; ATP-DEPENDENT RNA HELICASE DDX6_DHH1; 1.
DR PANTHER; PTHR47963; DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000009183}.
FT DOMAIN 114..296
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 325..486
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
SQ SEQUENCE 486 AA; 54359 MW; F5F7C6DFC3D385B9 CRC64;
MASFPTAQFL SLFRTFSGKS CPPRALAPSL NSNRRTDSTV HFTRRVSNSN CNAKPAQATL
NSSSITEASD IGERTLTLRE ICQGCVPEHV IALICFRIEE VGFIVPTDVQ QQALPVLLSG
RDCILHAQTG SGKTLTYLLL IFSVVNTKIS AVQALIVVPT RELGIQVTKV ARMLAAKPME
PELEQKSCTV MALLDGGMLK RHKSWLKAEP PTIVVATVRS LCQMLEKQIF KLESMRVLVI
DEVDFMFNAS KQVGSLRKLL TSYSSTNNRQ TVFASASIPQ HRRFLHDCIQ QKWTKSDVVH
VHVNPIEPMP SSLHHRFVIC NKYERRQTLL SLLHSDAPEC GIIFVGEQSE KSKKAGNAPS
ATLLIDFLKT SYGGCPDILL LEEDMNFNLR AASLSEVRQR GGYLLISTDI AARGVDLPET
THIYNFDLPR TVVDYLHRAG RAARKPFSDQ KCCVTNIITS EERFVLQRYE NELMFHCEEL
FLSTQC
//
