ID D7T9A1_VITVI Unreviewed; 465 AA.
AC D7T9A1;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 24-JAN-2024, entry version 65.
DE RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};
GN OrderedLocusNames=VIT_01s0011g02950 {ECO:0000313|EMBL:CBI27072.3};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CBI27072.3, ECO:0000313|Proteomes:UP000009183};
RN [1] {ECO:0000313|Proteomes:UP000009183}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pinot noir / PN40024 {ECO:0000313|Proteomes:UP000009183};
RX PubMed=17721507; DOI=10.1038/nature06148;
RG The French-Italian Public Consortium for Grapevine Genome Characterization.;
RA Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A.,
RA Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F.,
RA Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.,
RA Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E.,
RA Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M.,
RA Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M.,
RA Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E.,
RA Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M.,
RA Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G.,
RA Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F.,
RA Wincker P.;
RT "The grapevine genome sequence suggests ancestral hexaploidization in major
RT angiosperm phyla.";
RL Nature 449:463-467(2007).
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DR EMBL; FN595752; CBI27072.3; -; Genomic_DNA.
DR AlphaFoldDB; D7T9A1; -.
DR STRING; 29760.D7T9A1; -.
DR PaxDb; 29760-VIT_01s0011g02950-t01; -.
DR eggNOG; ENOG502R79W; Eukaryota.
DR HOGENOM; CLU_031159_0_0_1; -.
DR InParanoid; D7T9A1; -.
DR OMA; ARLYCAG; -.
DR Proteomes; UP000009183; Chromosome 1.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR019396; TM_Fragile-X-F-assoc.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46859; TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN; 1.
DR PANTHER; PTHR46859:SF6; TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN; 1.
DR Pfam; PF10269; Tmemb_185A; 1.
DR Pfam; PF13920; zf-C3HC4_3; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Reference proteome {ECO:0000313|Proteomes:UP000009183};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT TRANSMEM 6..28
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 35..53
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 73..93
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 105..123
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 152..172
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 184..203
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 251..269
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 281..303
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 418..453
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
SQ SEQUENCE 465 AA; 52882 MW; CF5328BCDD155161 CRC64;
MSWRRVATSL QAPAAHGLLL TFTLLLVLKL DHAVSYSWWI IFAPLWLFHA VVARGRFSLP
APSMPHDRHW APFHAVTATP LLVAFELLLC IYLQHSYVIK CIAAVNLKIV FLPLLALEAA
ILIDNIRMCK ALMPGDDESI SDEAIWETLP HFWVAISMVF FIAATTFTLL KLCGDVAALG
WWDLFINFGI AECFASIVCT RWYNPAIHRN SHIRQTGSSS MIIRYLDWNS GLVVSSDEDQ
HQSRLCDLQD IGGHIMKIPL VGFQILLFMR LEGTPSSARH IPIPLLFAPL FLLQGIGVLF
ALYRLVEKIV LLLHSAAGTE RYFAISSKVR SYFGFLHHGS RLLGWWSIDE GSREEQARLY
YAGASGYNTF SPDTVKKLPK SDLAEEIWRL QAALGEQTEI TKFSQQEFER LQNEKILCRV
CFDEQINMVL LPCRHHVLCS TCCEKCKRCP ICRVFIEERL PVYDV
//
