ID D7TQ98_VITVI Unreviewed; 842 AA.
AC D7TQ98;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 75.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0000259|Pfam:PF17177};
GN OrderedLocusNames=VIT_08s0040g03240 {ECO:0000313|EMBL:CBI32618.3};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CBI32618.3, ECO:0000313|Proteomes:UP000009183};
RN [1] {ECO:0000313|Proteomes:UP000009183}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pinot noir / PN40024 {ECO:0000313|Proteomes:UP000009183};
RX PubMed=17721507; DOI=10.1038/nature06148;
RG The French-Italian Public Consortium for Grapevine Genome Characterization.;
RA Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A.,
RA Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F.,
RA Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.,
RA Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E.,
RA Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M.,
RA Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M.,
RA Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E.,
RA Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M.,
RA Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G.,
RA Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F.,
RA Wincker P.;
RT "The grapevine genome sequence suggests ancestral hexaploidization in major
RT angiosperm phyla.";
RL Nature 449:463-467(2007).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; FN596008; CBI32618.3; -; Genomic_DNA.
DR RefSeq; XP_002273255.1; XM_002273219.3.
DR AlphaFoldDB; D7TQ98; -.
DR STRING; 29760.D7TQ98; -.
DR PaxDb; 29760-VIT_08s0040g03240-t01; -.
DR EnsemblPlants; Vitvi08g01152_t001; Vitvi08g01152_P001; Vitvi08g01152.
DR GeneID; 100260184; -.
DR Gramene; Vitvi08g01152_t001; Vitvi08g01152_P001; Vitvi08g01152.
DR KEGG; vvi:100260184; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_017214_0_0_1; -.
DR InParanoid; D7TQ98; -.
DR OMA; CGDYLKS; -.
DR OrthoDB; 35426at2759; -.
DR Proteomes; UP000009183; Chromosome 8.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0006397; P:mRNA processing; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR033443; PPR_long.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 7.
DR PANTHER; PTHR47942:SF63; ATPASE EXPRESSION PROTEIN 3; 1.
DR PANTHER; PTHR47942; TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED; 1.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF13041; PPR_2; 1.
DR Pfam; PF13812; PPR_3; 1.
DR Pfam; PF17177; PPR_long; 1.
DR PROSITE; PS51375; PPR; 7.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000009183};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT DOMAIN 218..337
FT /note="Pentacotripeptide-repeat region of PRORP"
FT /evidence="ECO:0000259|Pfam:PF17177"
FT REPEAT 312..342
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 351..385
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 386..420
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 421..455
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 533..567
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 568..602
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 603..640
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 12..49
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 34..48
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 842 AA; 94426 MW; 18A6675CFB4C99DC CRC64;
MRDLVLLGSS IVLPPDPIPP HHRTKPKPKP KPKPSLLTST SARLSPPISS LRSRHPLLSD
VRWDLNNYSD LATKLVQDGR FDDFSTMAET LILSGVELSQ LVELVSAGIS GLLREGRVYC
VVEVLRKVDK LGICPLELFD GSTLELLSKE CRRILNCGQV EEVVELIEIL DGFHFPVKKL
LEPLDFIKIC VNKRNPNLAV RYACILPHAQ ILFCTIIHEF GKKRDLGSAL TAFEASKQKL
IGPNMYCYRT MIDVCGLCSH YQKSRYIYEE LLAQKITPNI YVFNSLMNVN VHDLSYTFNV
YKNMQNLGVT ADMASYNILL KACCVAGRVD LAQEIYREVQ NLESNGMLKL DVFTYSTIIK
VFADAKLWQM ALKIKEDMLS AGVIPNTVTW SALISSCANA GITEQAIQLF KEMLLAGCEP
NSQCYNILLH ACVEACQYDR AFRLFQSWKD SRFQEISGGT GNGNTVGVEL KHQNCITSMP
NCLSNSHHLS FSKSFPFTPT TTTYNILMKA CGTDYYRAKA LMDEMKTAGL SPNHISWSIL
IDICGGTGNI VGAVRILKTM REAGIKPDVV AYTTAIKYCV ESKNLKIAFS LFAEMKRYQI
QPNLVTYNTL LRARSRYGSL HEVQQCLAIY QHMRKAGYKS NDYYLKELIE EWCEGVIQDN
NLNQSKFSSV NRADWGRPQS LLLEKVAAHL QKSVAESLAI DLQGLTQVEA RIVVLAVLRM
IKENYILGHP IKDDILIILG IKKVDANLVE HESPVKGAII KLLQDELGLE VAFAGPKIAL
DKRINLGGPP GSDPDWQEAL GRNRLPTELE SSTRRPAVLQ RFKVTRKSLD HWLQRRVGAT
RG
//
