ID D8GNU9_CLOLD Unreviewed; 895 AA.
AC D8GNU9;
DT 05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2010, sequence version 1.
DT 24-JAN-2024, entry version 56.
DE SubName: Full=Predicted penicillin-binding protein 2 {ECO:0000313|EMBL:ADK13795.1};
GN OrderedLocusNames=CLJU_c07250 {ECO:0000313|EMBL:ADK13795.1};
OS Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC).
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=748727 {ECO:0000313|EMBL:ADK13795.1, ECO:0000313|Proteomes:UP000001656};
RN [1] {ECO:0000313|EMBL:ADK13795.1, ECO:0000313|Proteomes:UP000001656}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 55383 / DSM 13528 / PETC
RC {ECO:0000313|Proteomes:UP000001656};
RX PubMed=20616070; DOI=10.1073/pnas.1004716107;
RA Kopke M., Held C., Hujer S., Liesegang H., Wiezer A., Wollherr A.,
RA Ehrenreich A., Liebl W., Gottschalk G., Durre P.;
RT "Clostridium ljungdahlii represents a microbial production platform based
RT on syngas.";
RL Proc. Natl. Acad. Sci. U.S.A. 107:13087-13092(2010).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004167}; Single-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004167}.
CC -!- SIMILARITY: Belongs to the transpeptidase family.
CC {ECO:0000256|ARBA:ARBA00007171}.
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DR EMBL; CP001666; ADK13795.1; -; Genomic_DNA.
DR RefSeq; WP_013237395.1; NZ_LITS01000021.1.
DR AlphaFoldDB; D8GNU9; -.
DR STRING; 748727.CLJU_c07250; -.
DR KEGG; clj:CLJU_c07250; -.
DR PATRIC; fig|748727.19.peg.1427; -.
DR eggNOG; COG0768; Bacteria.
DR HOGENOM; CLU_009289_1_1_9; -.
DR OMA; TLACKTG; -.
DR OrthoDB; 9757901at2; -.
DR Proteomes; UP000001656; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0008658; F:penicillin binding; IEA:InterPro.
DR Gene3D; 3.40.710.10; DD-peptidase/beta-lactamase superfamily; 1.
DR Gene3D; 3.90.1310.10; Penicillin-binding protein 2a (Domain 2); 1.
DR Gene3D; 1.10.10.1230; Penicillin-binding protein, N-terminal non-catalytic domain, head sub-domain; 1.
DR InterPro; IPR012338; Beta-lactam/transpept-like.
DR InterPro; IPR005311; PBP_dimer.
DR InterPro; IPR036138; PBP_dimer_sf.
DR InterPro; IPR001460; PCN-bd_Tpept.
DR PANTHER; PTHR30627; PEPTIDOGLYCAN D,D-TRANSPEPTIDASE; 1.
DR PANTHER; PTHR30627:SF2; PEPTIDOGLYCAN D,D-TRANSPEPTIDASE MRDA; 1.
DR Pfam; PF03717; PBP_dimer; 1.
DR Pfam; PF00905; Transpeptidase; 2.
DR SUPFAM; SSF56601; beta-lactamase/transpeptidase-like; 1.
DR SUPFAM; SSF56519; Penicillin binding protein dimerisation domain; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..32
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 55..323
FT /note="Penicillin-binding protein dimerisation"
FT /evidence="ECO:0000259|Pfam:PF03717"
FT DOMAIN 376..590
FT /note="Penicillin-binding protein transpeptidase"
FT /evidence="ECO:0000259|Pfam:PF00905"
FT DOMAIN 707..870
FT /note="Penicillin-binding protein transpeptidase"
FT /evidence="ECO:0000259|Pfam:PF00905"
SQ SEQUENCE 895 AA; 98716 MW; 7BE056A6CCE37AA4 CRC64;
MKEKKHSNIT RYTVLSVIMV AIFATIAGRL LFLQVVKGQE YKEQSNNKSL TEIQEPAPRG
KILDKDGNIL ATSNQSYVLI YNQTDENDKT FFPTMSKVFK ILDESGESQK DDFELKINPY
RFEFRSDDEE TRKNLEIKFK RDRGLNDEIE KKIKSKNKNI SEDDLKSLVN KELLKITPED
TFKKLIAKYK ISSAYSLEDQ RRYMIIKDTL KMQSYSGYKP VTVASNIKKD TAFKFLQMSN
ELSGIDVDTQ PIRYYPNNEL GSSFIGYISK ISSDYDKYKE KGYDVSSDYV GQAGIEGALE
DRLKGSKGGK IVKLDKNGKI VQELGTKDPS PGETVQLTVD SKVQKAAEDS LDTTMAKLRA
NPYGQNRSDT TNATRGAAVA IDVNTGAIIA MASRPGYDPN MFAQPGMISQ DLYQQYFNPD
LGAFGKEYIE KRNITSNFPG ETEDQVLNTL FPLDTSIKNN TTIRQDVYDI YPKPFYNYAT
QSLIPPGSTF KPMTAVAGLE SGAINPGFCV DDEGQFDQGG KIVKFILDGR NGVVDLAAAI
QKSSNPYFMT VGKLIRQALG DDGLAKYAWK FGLGVPVNSD VKASTGIEIP EKFGQVYNTV
SNKNTYASTY LWQTMAYLRD GQDDKGHKLV SLNLYDNSSD SSKVKQIKND IKTLIKNSVK
DGKSAFDKAK YKELFSELVK EDPNNKKDIS DEKMDDLIDV IYSITVSDAN AQLKVPANIE
NAAIGQGLNQ FTPVQMANYI ATLVNGGTRY KVHLVDKYLN SNGGIIEQVK PEVIQKTGIS
PETIAAIKAG MGAVNEKGGT GSQVFGGFPI STGGKTGTAS LGNQDQIGRT DYSEYVAFAP
LDKPEIAVYA VIFDGGQGAS GAAYVARDIL SAYFTETGRI TTSAPTSTST QQNSN
//