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Database: UniProt
Entry: D8QQ08_SELML
LinkDB: D8QQ08_SELML
Original site: D8QQ08_SELML 
ID   D8QQ08_SELML            Unreviewed;       876 AA.
AC   D8QQ08;
DT   05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT   05-OCT-2010, sequence version 1.
DT   08-NOV-2023, entry version 51.
DE   RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   ORFNames=SELMODRAFT_74627 {ECO:0000313|EMBL:EFJ37709.1};
OS   Selaginella moellendorffii (Spikemoss).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
OX   NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514};
RN   [1] {ECO:0000313|EMBL:EFJ37709.1, ECO:0000313|Proteomes:UP000001514}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=21551031; DOI=10.1126/science.1203810;
RA   Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M.,
RA   dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W.,
RA   Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D.,
RA   Chapple C., Cheng C., Correa L.G., Dacre M., DeBarry J., Dreyer I.,
RA   Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K.,
RA   Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M.,
RA   Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G.,
RA   Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y.,
RA   Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K.,
RA   Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R.,
RA   Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B.,
RA   Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y.,
RA   Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N.,
RA   Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N.,
RA   Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S.,
RA   Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q.,
RA   Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J.,
RA   Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.;
RT   "The Selaginella genome identifies genetic changes associated with the
RT   evolution of vascular plants.";
RL   Science 332:960-963(2011).
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DR   EMBL; GL377565; EFJ37709.1; -; Genomic_DNA.
DR   RefSeq; XP_002960170.1; XM_002960124.1.
DR   AlphaFoldDB; D8QQ08; -.
DR   EnsemblPlants; EFJ37709; EFJ37709; SELMODRAFT_74627.
DR   Gramene; EFJ37709; EFJ37709; SELMODRAFT_74627.
DR   KEGG; smo:SELMODRAFT_74627; -.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_15_6_1; -.
DR   InParanoid; D8QQ08; -.
DR   Proteomes; UP000001514; Unassembled WGS sequence.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 7.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR045215; PPR_prot_At1g15510.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 6.
DR   PANTHER; PTHR24015:SF2033; DYW_DEAMINASE DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR   Pfam; PF01535; PPR; 9.
DR   Pfam; PF13041; PPR_2; 1.
DR   PROSITE; PS51375; PPR; 7.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000001514};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REPEAT          98..132
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          200..235
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          271..305
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          405..440
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          508..542
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          578..612
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          726..760
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ   SEQUENCE   876 AA;  95401 MW;  20E37D4C73301ED8 CRC64;
     MILRRWAFPP HSCELERALL QHLERHKDKV IDVYGFAGLI QACSRSGSPR AAKQLEAEIT
     RRGFRGNKSL GNHLINLYGR LGCVRDAAAA FDGIEEKNVV SFNAMITAYA QNGHSRQGLG
     LFRKLLLLDS KVANIVSFIS VIKSCCNERL EECRWIHGLV DEAGLSTSNI VVGTALINMY
     AVCGSVADAE AVFGSMESRN EITWSALIAA HAAVPGHACQ IWDIFRAMEN SGVVPNEVTF
     ISMLSSCTVA EDLSVGRLIH EAADKYGYGS DVVVGNSVLN MYGKCGDVDR ARQLFDEMGD
     KHAAPVAWNS LMGAYTQTRN FVLAVELFSL MQLEGVIANK VTFLAALNAC AGLAEMTAGK
     TVVDCVVECG LFGDDLVKTA LVSLFGKCGY LDVAESVLGE ILVPDSVSWN SIVAAYASQQ
     GHDQDVLRGF HLMHSHGLIP EDGVFVAALN ACSNLGALKQ GKLVHYLVRE TGVESTDVFT
     ALVNMYGKCG ELLTAREIFS SMPDEFRDAL TWNGLINAHT QHGKPEEALS FYRRMQQEGT
     RPRKSVFVSV LNAVAALGSS VEGRRIHEQV AECSLDLDST VGTLLVNMYA KSGDVDTAWE
     IFERMQHSDT VTWNSMLGAC IQQRPRSSEA PHEQQENEAV VVRLFARMLL EGIRVDRVTL
     LTMLSACASH ASLSHGKKLH GLVSELNLSL ESDTGLFNAL VTMYSRCGSW EVSQAMFHAM
     GSCHGDLITW NSMITACARH GQALQAVELV RGMEQAGWSP DKVTLTVILS ACSHAGLLDK
     AYECFQLMRG EYEIDPGPDH YGSIVDLLCR AGKLGEAEAL IEKLPDPASA VTWRSLLGGC
     SNHGDLVLGR RAADELFGMD PRHHTTYVML SNTYCG
//
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