ID D8QW58_SELML Unreviewed; 908 AA.
AC D8QW58;
DT 05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2010, sequence version 1.
DT 27-MAR-2024, entry version 66.
DE RecName: Full=LisH domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=SELMODRAFT_79275 {ECO:0000313|EMBL:EFJ36173.1};
OS Selaginella moellendorffii (Spikemoss).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
OX NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514};
RN [1] {ECO:0000313|EMBL:EFJ36173.1, ECO:0000313|Proteomes:UP000001514}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=21551031; DOI=10.1126/science.1203810;
RA Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M.,
RA dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W.,
RA Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D.,
RA Chapple C., Cheng C., Correa L.G., Dacre M., DeBarry J., Dreyer I.,
RA Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K.,
RA Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M.,
RA Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G.,
RA Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y.,
RA Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K.,
RA Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R.,
RA Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B.,
RA Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y.,
RA Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N.,
RA Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N.,
RA Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S.,
RA Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q.,
RA Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J.,
RA Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.;
RT "The Selaginella genome identifies genetic changes associated with the
RT evolution of vascular plants.";
RL Science 332:960-963(2011).
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DR EMBL; GL377567; EFJ36173.1; -; Genomic_DNA.
DR RefSeq; XP_002962710.1; XM_002962664.1.
DR AlphaFoldDB; D8QW58; -.
DR STRING; 88036.D8QW58; -.
DR EnsemblPlants; EFJ36173; EFJ36173; SELMODRAFT_79275.
DR Gramene; EFJ36173; EFJ36173; SELMODRAFT_79275.
DR KEGG; smo:SELMODRAFT_79275; -.
DR eggNOG; KOG0266; Eukaryota.
DR HOGENOM; CLU_000288_57_28_1; -.
DR InParanoid; D8QW58; -.
DR OMA; GHDKKTS; -.
DR Proteomes; UP000001514; Unassembled WGS sequence.
DR GO; GO:0003714; F:transcription corepressor activity; IEA:InterPro.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR044716; LEUNIG-like.
DR InterPro; IPR006594; LisH.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR44376:SF5; LISH DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR44376; TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8; 1.
DR Pfam; PF08513; LisH; 1.
DR Pfam; PF00400; WD40; 5.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00667; LisH; 1.
DR SMART; SM00320; WD40; 7.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS50896; LISH; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 2.
DR PROSITE; PS50082; WD_REPEATS_2; 4.
DR PROSITE; PS50294; WD_REPEATS_REGION; 4.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000001514};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT REPEAT 625..666
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 667..708
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 710..752
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 876..908
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REGION 234..322
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 441..554
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 79..162
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 270..300
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 441..488
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 519..554
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 908 AA; 99856 MW; 0CFE7D301FABFE8C CRC64;
MAQSNWEADK MLDVYIHDYL VKKNLQASAK AFQTEGKVSG DPVAIDAPGG FLFEWWSVFW
DIFIARTNEK HSEVAASYIE TQQLKAREQQ QQHQHLQHQQ QQQQIQQQQH QQQHQQQLQQ
SQQQQQQQQQ LQQSQQQQQQ QQQQLQQNQQ QHQQQQQHQQ QQQHQQQLHM QQIQLLQRQA
QQQQQPRRDL AINAAANGMG GDSLPPTANA MATKIYEERL KHPHQRDTLE DIKRYGEPPG
QLLDPSPTSL LKGAPTPGQP SGPLLPASAA GLQQVQNRPQ LSGVSQDSKS DGNVVLNQRS
PAPDPSMFGH AKPNLLSPGV NQGGNAMSLK GWSLAGMDQL RPTLVQNQKP SLQASQAYHI
LSPQHQHLLL QAQAQGSLPS SNSALLGDVD GRRFRMLLSR NQNQMGKDGQ AGLSEVGSPM
QAATLLPRGN PQDQGEMLMK MKMAQSQQAQ SGQQPQPPQS SQQGQQAQQQ PATPQQQQQQ
QQQLQQERMG VVGVDGALSN SFRGTGDQVA AKGPSGRKRK QPASSSGPAN STGTANTAGP
NSPSSPSTHT PGDVISMAGA LQQNGNISKS LMMYGSDGAG TLASPTNQLA DIDRFGEDPS
LDDNVESFLS HDDADHRDGF EVGCLRASTS KVVCCHFSSD GKLLASAGHD KKAVLWNMDT
LKLKSTLEEH TFLITDVRFS PNSTRLATSS FDKTVRVWDA DNPSYSLRTF TGHQTSVMSL
DFHPVNEDLL CSCDGDSEIR YWSVSQGVCT RVFKGGMAQT RFQPRVGRLL AAAAENVVSI
FDVDTETCVH SLQRHTKPVH SVCWDATGDY VASVSEDSVR VWALNGSDGD CIHELNCNGN
KFHSCVFHPK LPTLLVIGCY QSLELWNMQE NKTMTIPAHD GLIAALAQSP ATGMVASASH
DKCVRLWK
//
