ID D8R0I4_SELML Unreviewed; 313 AA.
AC D8R0I4;
DT 05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2010, sequence version 1.
DT 24-JAN-2024, entry version 50.
DE RecName: Full=Polymerase nucleotidyl transferase domain-containing protein {ECO:0008006|Google:ProtNLM};
DE Flags: Fragment;
GN ORFNames=SELMODRAFT_22150 {ECO:0000313|EMBL:EFJ34979.1};
OS Selaginella moellendorffii (Spikemoss).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
OX NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514};
RN [1] {ECO:0000313|EMBL:EFJ34979.1, ECO:0000313|Proteomes:UP000001514}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=21551031; DOI=10.1126/science.1203810;
RA Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M.,
RA dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W.,
RA Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D.,
RA Chapple C., Cheng C., Correa L.G., Dacre M., DeBarry J., Dreyer I.,
RA Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K.,
RA Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M.,
RA Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G.,
RA Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y.,
RA Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K.,
RA Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R.,
RA Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B.,
RA Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y.,
RA Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N.,
RA Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N.,
RA Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S.,
RA Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q.,
RA Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J.,
RA Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.;
RT "The Selaginella genome identifies genetic changes associated with the
RT evolution of vascular plants.";
RL Science 332:960-963(2011).
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DR EMBL; GL377569; EFJ34979.1; -; Genomic_DNA.
DR RefSeq; XP_002964646.1; XM_002964600.1.
DR AlphaFoldDB; D8R0I4; -.
DR STRING; 88036.D8R0I4; -.
DR EnsemblPlants; EFJ34979; EFJ34979; SELMODRAFT_22150.
DR Gramene; EFJ34979; EFJ34979; SELMODRAFT_22150.
DR KEGG; smo:SELMODRAFT_22150; -.
DR eggNOG; KOG1906; Eukaryota.
DR HOGENOM; CLU_013572_0_0_1; -.
DR InParanoid; D8R0I4; -.
DR OMA; RCSHNIQ; -.
DR Proteomes; UP000001514; Unassembled WGS sequence.
DR GO; GO:0005730; C:nucleolus; IBA:GO_Central.
DR GO; GO:0031499; C:TRAMP complex; IBA:GO_Central.
DR GO; GO:1990817; F:poly(A) RNA polymerase activity; IEA:InterPro.
DR GO; GO:0031123; P:RNA 3'-end processing; IBA:GO_Central.
DR CDD; cd05402; NT_PAP_TUTase; 1.
DR Gene3D; 1.10.1410.10; -; 1.
DR Gene3D; 3.30.460.10; Beta Polymerase, domain 2; 1.
DR InterPro; IPR043519; NT_sf.
DR InterPro; IPR002058; PAP_assoc.
DR InterPro; IPR002934; Polymerase_NTP_transf_dom.
DR InterPro; IPR045862; Trf4-like.
DR PANTHER; PTHR23092:SF15; INACTIVE NON-CANONICAL POLY(A) RNA POLYMERASE PROTEIN TRF4-2-RELATED; 1.
DR PANTHER; PTHR23092; POLY(A) RNA POLYMERASE; 1.
DR Pfam; PF01909; NTP_transf_2; 1.
DR Pfam; PF03828; PAP_assoc; 1.
DR SUPFAM; SSF81301; Nucleotidyltransferase; 1.
DR SUPFAM; SSF81631; PAP/OAS1 substrate-binding domain; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001514}.
FT DOMAIN 33..123
FT /note="Polymerase nucleotidyl transferase"
FT /evidence="ECO:0000259|Pfam:PF01909"
FT DOMAIN 198..257
FT /note="PAP-associated"
FT /evidence="ECO:0000259|Pfam:PF03828"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:EFJ34979.1"
FT NON_TER 313
FT /evidence="ECO:0000313|EMBL:EFJ34979.1"
SQ SEQUENCE 313 AA; 34595 MW; 1C0249793BE28B63 CRC64;
FRSPVLQLHQ EILDFCTFIS PTVEEEAERA AAINRISNAI KSLWSHCKIE IFGSYATGLY
LPTSDIDAVI LDSGCDRIVS GLRAISIELR KRKLARKITI ISKARVPIIK FVESTSGISF
DISFDLRNGP EAAKFIQRAI GTLPPLRPLC MVLKIFLQQR ELNEVYCGGI GSYGLLIMLI
THLQMHPSRH HGGNLETNLG VLLVLDFFDL FGRSLNIREV GVSCADGGRF FSKVSKGFVD
YKRPFLLAVE DPQAPENDIG KNSFQIPKIR AAFVLAHRLL ATTTANTGNT GILGRIIRGD
SILTNRKRAT AGD
//