ID D8R6B0_SELML Unreviewed; 1146 AA.
AC D8R6B0;
DT 05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2010, sequence version 1.
DT 24-JAN-2024, entry version 58.
DE RecName: Full=Pentatricopeptide repeat-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=SELMODRAFT_407654 {ECO:0000313|EMBL:EFJ32639.1};
OS Selaginella moellendorffii (Spikemoss).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
OX NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514};
RN [1] {ECO:0000313|EMBL:EFJ32639.1, ECO:0000313|Proteomes:UP000001514}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=21551031; DOI=10.1126/science.1203810;
RA Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M.,
RA dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W.,
RA Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D.,
RA Chapple C., Cheng C., Correa L.G., Dacre M., DeBarry J., Dreyer I.,
RA Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K.,
RA Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M.,
RA Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G.,
RA Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y.,
RA Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K.,
RA Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R.,
RA Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B.,
RA Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y.,
RA Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N.,
RA Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N.,
RA Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S.,
RA Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q.,
RA Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J.,
RA Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.;
RT "The Selaginella genome identifies genetic changes associated with the
RT evolution of vascular plants.";
RL Science 332:960-963(2011).
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DR EMBL; GL377572; EFJ32639.1; -; Genomic_DNA.
DR RefSeq; XP_002966612.1; XM_002966566.1.
DR AlphaFoldDB; D8R6B0; -.
DR STRING; 88036.D8R6B0; -.
DR EnsemblPlants; EFJ32639; EFJ32639; SELMODRAFT_407654.
DR Gramene; EFJ32639; EFJ32639; SELMODRAFT_407654.
DR KEGG; smo:SELMODRAFT_407654; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_277125_0_0_1; -.
DR InParanoid; D8R6B0; -.
DR Proteomes; UP000001514; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 2.
DR PANTHER; PTHR47925:SF84; DYW_DEAMINASE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47925; OS01G0913400 PROTEIN-RELATED; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF13041; PPR_2; 2.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 4.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000001514};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 5..39
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 98..132
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 189..223
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 443..477
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 588..609
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 797..825
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 888..915
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 588..606
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 798..819
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1146 AA; 126943 MW; A1669A786FF62EA6 CRC64;
MPAPNVVSWN VLLSACSRRG RPDEARQLFH WMPQHDTVSW NTVEHMFAAS GHLRDARQTF
DAMPQRSVLS WNTLVSAYAF QRQLRDARLV LDLMPARNSI SVNTMIKGYA SAGALHAAAL
LFSAMPNRDL VSWNSMLTAA SCWQQHQRLW HRMPRWDVVS CNARIQACLG SSLHADEGAA
TFWAMPGRDV VSWNTAAAGY ARLGRPRHAR RLLELMPQRD LVSANCWLHY CCHTPGATKL
GFDAMPHRDS ASWNSMLASC ELPVADELFW RRMPAWDVIS CTLMVAAYGR SLGGMDAAAR
AFAAMQHRDV AAWTAIISAY ATHGDCARAV AQSWSMALDG LEPNHVTYTV LLHACAQAGL
LEQGAACLAA AGVTVADEQH YSCCVDMLAR AKQLAAAEEL IAAMPVPPTA VTWTAMLAAC
RVQGDVQRAD TAAAQLLDLD PASALPYVLL LSVYTEAGRT EEATALRRLM SRRGGLPAKV
VGMASSVQGQ VLGQPSCSPS LITHVRTAVL SHLGVDPVDA LAKGTLQQNS VELHVHHHHH
VYVDQNHRMH DAFWKEYEEL ANTTLLDMLW AKNKPCYGKV NITSPTLEQQ TPAEGAQANN
KGSATKQVRP HKLKRLFPGN KSSQGVDKAN LCATTKSKVC CLEAAAQERI KKLSDLGTLV
NIAKADARGF QTDTKEPFCQ TQPNVPHTSQ QHKKHTLNER FQAAEASFVA ALNAARDRLR
ELVKACVRQY PRKFVPEEIL RKQKELQALE RIQNLFNNQN DNSTGISLMS TSVASLLEKS
PSHGSFDVSG CTVDEIGAHA DPNHELSKSR AEPSRSGRKP IPSEEAPVWL SEQGWRDVYA
SPAVLANGIS TPLEYLTLFQ MHQSRAACNP WLKLLETELA KLVSALGFQQ IEDGLENLDK
KLGNVEQAAE TLREKEVKRS EQQPQRSLSD SITSCCAVKN TQLEHILSFL ISTSEKFQSF
VKVTKEALLD EDRKNTLFKQ CAGDKRLHLE VLDSGFELNS ELLDILNRME SALTHFARFS
TELLPFLSEH LSVTKKLRDA TSTSAIRESS SMDGAFENFM LIEDIEKTKK HSEEMVQIMG
SLEHQYNILK TKFEQLSTFD EGHSRESREN VPNNQQMESL SNQKLELENG IRNVSSTIPE
AGIFFT
//