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Database: UniProt
Entry: D8R6B0_SELML
LinkDB: D8R6B0_SELML
Original site: D8R6B0_SELML 
ID   D8R6B0_SELML            Unreviewed;      1146 AA.
AC   D8R6B0;
DT   05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT   05-OCT-2010, sequence version 1.
DT   24-JAN-2024, entry version 58.
DE   RecName: Full=Pentatricopeptide repeat-containing protein {ECO:0008006|Google:ProtNLM};
GN   ORFNames=SELMODRAFT_407654 {ECO:0000313|EMBL:EFJ32639.1};
OS   Selaginella moellendorffii (Spikemoss).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
OX   NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514};
RN   [1] {ECO:0000313|EMBL:EFJ32639.1, ECO:0000313|Proteomes:UP000001514}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=21551031; DOI=10.1126/science.1203810;
RA   Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M.,
RA   dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W.,
RA   Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D.,
RA   Chapple C., Cheng C., Correa L.G., Dacre M., DeBarry J., Dreyer I.,
RA   Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K.,
RA   Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M.,
RA   Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G.,
RA   Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y.,
RA   Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K.,
RA   Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R.,
RA   Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B.,
RA   Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y.,
RA   Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N.,
RA   Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N.,
RA   Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S.,
RA   Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q.,
RA   Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J.,
RA   Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.;
RT   "The Selaginella genome identifies genetic changes associated with the
RT   evolution of vascular plants.";
RL   Science 332:960-963(2011).
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DR   EMBL; GL377572; EFJ32639.1; -; Genomic_DNA.
DR   RefSeq; XP_002966612.1; XM_002966566.1.
DR   AlphaFoldDB; D8R6B0; -.
DR   STRING; 88036.D8R6B0; -.
DR   EnsemblPlants; EFJ32639; EFJ32639; SELMODRAFT_407654.
DR   Gramene; EFJ32639; EFJ32639; SELMODRAFT_407654.
DR   KEGG; smo:SELMODRAFT_407654; -.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_277125_0_0_1; -.
DR   InParanoid; D8R6B0; -.
DR   Proteomes; UP000001514; Unassembled WGS sequence.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 2.
DR   PANTHER; PTHR47925:SF84; DYW_DEAMINASE DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR47925; OS01G0913400 PROTEIN-RELATED; 1.
DR   Pfam; PF01535; PPR; 4.
DR   Pfam; PF13041; PPR_2; 2.
DR   SUPFAM; SSF48452; TPR-like; 1.
DR   PROSITE; PS51375; PPR; 4.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001514};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REPEAT          5..39
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          98..132
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          189..223
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          443..477
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REGION          588..609
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          797..825
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          888..915
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COMPBIAS        588..606
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        798..819
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1146 AA;  126943 MW;  A1669A786FF62EA6 CRC64;
     MPAPNVVSWN VLLSACSRRG RPDEARQLFH WMPQHDTVSW NTVEHMFAAS GHLRDARQTF
     DAMPQRSVLS WNTLVSAYAF QRQLRDARLV LDLMPARNSI SVNTMIKGYA SAGALHAAAL
     LFSAMPNRDL VSWNSMLTAA SCWQQHQRLW HRMPRWDVVS CNARIQACLG SSLHADEGAA
     TFWAMPGRDV VSWNTAAAGY ARLGRPRHAR RLLELMPQRD LVSANCWLHY CCHTPGATKL
     GFDAMPHRDS ASWNSMLASC ELPVADELFW RRMPAWDVIS CTLMVAAYGR SLGGMDAAAR
     AFAAMQHRDV AAWTAIISAY ATHGDCARAV AQSWSMALDG LEPNHVTYTV LLHACAQAGL
     LEQGAACLAA AGVTVADEQH YSCCVDMLAR AKQLAAAEEL IAAMPVPPTA VTWTAMLAAC
     RVQGDVQRAD TAAAQLLDLD PASALPYVLL LSVYTEAGRT EEATALRRLM SRRGGLPAKV
     VGMASSVQGQ VLGQPSCSPS LITHVRTAVL SHLGVDPVDA LAKGTLQQNS VELHVHHHHH
     VYVDQNHRMH DAFWKEYEEL ANTTLLDMLW AKNKPCYGKV NITSPTLEQQ TPAEGAQANN
     KGSATKQVRP HKLKRLFPGN KSSQGVDKAN LCATTKSKVC CLEAAAQERI KKLSDLGTLV
     NIAKADARGF QTDTKEPFCQ TQPNVPHTSQ QHKKHTLNER FQAAEASFVA ALNAARDRLR
     ELVKACVRQY PRKFVPEEIL RKQKELQALE RIQNLFNNQN DNSTGISLMS TSVASLLEKS
     PSHGSFDVSG CTVDEIGAHA DPNHELSKSR AEPSRSGRKP IPSEEAPVWL SEQGWRDVYA
     SPAVLANGIS TPLEYLTLFQ MHQSRAACNP WLKLLETELA KLVSALGFQQ IEDGLENLDK
     KLGNVEQAAE TLREKEVKRS EQQPQRSLSD SITSCCAVKN TQLEHILSFL ISTSEKFQSF
     VKVTKEALLD EDRKNTLFKQ CAGDKRLHLE VLDSGFELNS ELLDILNRME SALTHFARFS
     TELLPFLSEH LSVTKKLRDA TSTSAIRESS SMDGAFENFM LIEDIEKTKK HSEEMVQIMG
     SLEHQYNILK TKFEQLSTFD EGHSRESREN VPNNQQMESL SNQKLELENG IRNVSSTIPE
     AGIFFT
//
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