ID D8RC61_SELML Unreviewed; 1261 AA.
AC D8RC61;
DT 05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2010, sequence version 1.
DT 27-MAR-2024, entry version 68.
DE RecName: Full=Bromo domain-containing protein {ECO:0000259|PROSITE:PS50014};
GN ORFNames=SELMODRAFT_409700 {ECO:0000313|EMBL:EFJ29799.1};
OS Selaginella moellendorffii (Spikemoss).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
OX NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514};
RN [1] {ECO:0000313|EMBL:EFJ29799.1, ECO:0000313|Proteomes:UP000001514}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=21551031; DOI=10.1126/science.1203810;
RA Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M.,
RA dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W.,
RA Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D.,
RA Chapple C., Cheng C., Correa L.G., Dacre M., DeBarry J., Dreyer I.,
RA Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K.,
RA Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M.,
RA Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G.,
RA Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y.,
RA Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K.,
RA Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R.,
RA Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B.,
RA Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y.,
RA Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N.,
RA Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N.,
RA Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S.,
RA Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q.,
RA Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J.,
RA Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.;
RT "The Selaginella genome identifies genetic changes associated with the
RT evolution of vascular plants.";
RL Science 332:960-963(2011).
CC -!- SIMILARITY: Belongs to the AAA ATPase family.
CC {ECO:0000256|ARBA:ARBA00006914}.
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DR EMBL; GL377576; EFJ29799.1; -; Genomic_DNA.
DR RefSeq; XP_002968683.1; XM_002968637.1.
DR AlphaFoldDB; D8RC61; -.
DR STRING; 88036.D8RC61; -.
DR EnsemblPlants; EFJ29799; EFJ29799; SELMODRAFT_409700.
DR GeneID; 9650793; -.
DR Gramene; EFJ29799; EFJ29799; SELMODRAFT_409700.
DR KEGG; smo:SELMODRAFT_409700; -.
DR eggNOG; KOG0732; Eukaryota.
DR HOGENOM; CLU_007111_0_0_1; -.
DR InParanoid; D8RC61; -.
DR OMA; VFARFKM; -.
DR OrthoDB; 2783776at2759; -.
DR Proteomes; UP000001514; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0016887; F:ATP hydrolysis activity; IBA:GO_Central.
DR GO; GO:0003682; F:chromatin binding; IBA:GO_Central.
DR GO; GO:0042393; F:histone binding; IBA:GO_Central.
DR GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.20.920.10; Bromodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR041569; AAA_lid_3.
DR InterPro; IPR045199; ATAD2-like.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR003960; ATPase_AAA_CS.
DR InterPro; IPR001487; Bromodomain.
DR InterPro; IPR036427; Bromodomain-like_sf.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR23069; AAA DOMAIN-CONTAINING; 1.
DR PANTHER; PTHR23069:SF0; TAT-BINDING HOMOLOG 7; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF17862; AAA_lid_3; 1.
DR Pfam; PF00439; Bromodomain; 1.
DR PRINTS; PR00503; BROMODOMAIN.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00297; BROMO; 1.
DR SUPFAM; SSF47370; Bromodomain; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS00674; AAA; 1.
DR PROSITE; PS50014; BROMODOMAIN_2; 1.
PE 3: Inferred from homology;
KW Bromodomain {ECO:0000256|ARBA:ARBA00023117, ECO:0000256|PROSITE-
KW ProRule:PRU00035}; Reference proteome {ECO:0000313|Proteomes:UP000001514}.
FT DOMAIN 961..1023
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT REGION 1..53
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 110..129
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 136..331
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1064..1171
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 17..31
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 146..162
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 179..200
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 201..237
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 244..263
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 264..282
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 297..327
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1128..1142
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1143..1160
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1261 AA; 138759 MW; B334ED8533783D89 CRC64;
MPMEGNEAAA ATGDGGISAR SSGSSHSSSD SATPNRRRKR AFLGSKSVAS DAAVSDLPLA
LTRPVRNARL RNYYPDYSIY SGMPARRAKA RAKSSKNRGS MKQRLAKMLK PRHSNIDGGG
HHLRRSTRNR RMSVLYDDYS DEEDEEEIVR SYRSKSDEHA NSTKKSSGSI AAPRREGLRP
RNSSQRFERQ RVVESSQESA DDHETSDEDA EEGEDGEEDD DLESGEEEDE GEDGVAGEQE
KEVEAAGGDE DGEEEEEEEE EELEERDGKR RYELRARTET QRSPPKGDVT TPQKVFLAET
EKKRSREGGR SASRPLKRRR REEDSDDSLL VDEMEQGPGF FGARGGARGP HPFLPPTLDM
HGSTNWGLGV AASGWGHQGD FLGLGLANTG TQTAGASSKG GADIQPVQVD DTVSFDQVGG
LSHYIDSLKE MVFFPLLYPK FFESYHITPP RGVLLCGPPG TGKTLVARAL ASAAARAGQK
VNFYMRKGAD VLSKWVGEAE RQLRMLFEEA QRCQPSIIFF DEIDGLAPVR SSKSEQIHNS
IVSTLLALMD GLDSRGQVVV IGATNRIDAI DGALRRPGRF DREFVFPLPD SGARAEILDI
HTKSWHRRPS TELRDELAAA CVGYCGADLK ALCTEAAIRA FRQRYPQVYT SDEQFVIDAD
SIRVQKSHFY EAMSAITPAA HRGTLVHSRP LPPMLVPCLN GQLQTVVAAL SDIFPLLSNP
DGDESSENLT RLFGTHTGMI FPTVYKPRYL LCGTDSSGLD HLGPALLHKL ERFPVHSLGL
PSLLSDPSAK TPEEALVHIF GEARRNTPSI LYLPHFDSWW ETAQEQLRTV LLMLLADLPS
NLPLLLLGTS SARKSELDDE ACSVFGRHIY EVQVPTRDER DAFFTQVIKS LFTLSSEEET
TKPKKNAELP VLAKVPKVDK GPSEAELKAQ AEAEEHAIRR LRMCLRDVCN RLLYEKRFNI
FHFPVEAEEV PDYHTIVKTP MDVATLLLRV DKGHYRTRAA FMQDVELIPA SAKKYHGEDY
SNHTAARIVS RACALRDAVQ GMLSQMDPEL VAYCDRIASQ SQSGSAAAAA APPDEASKRP
DNNPGTPPEP QRSSARLRGI QPDLNLPANG NGDEAGPGGG EEEALPSNHT EEADEEEENE
EKPTPSPMDG GDRKDGEQDD EQQGEGEGQW LYGVGEDKIK AVKAKLLLHS EAFTVSELEM
LYARLCGRIR QQRRGHLTRS AILQSLQVFV EEEIATAAAA TAAAAAASPP LVATFRDHTH
S
//
