ID D8RFX6_SELML Unreviewed; 483 AA.
AC D8RFX6;
DT 05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2010, sequence version 1.
DT 27-MAR-2024, entry version 59.
DE RecName: Full=Zinc finger CCCH-type with G patch domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=SELMODRAFT_171130 {ECO:0000313|EMBL:EFJ29202.1};
OS Selaginella moellendorffii (Spikemoss).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
OX NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514};
RN [1] {ECO:0000313|EMBL:EFJ29202.1, ECO:0000313|Proteomes:UP000001514}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=21551031; DOI=10.1126/science.1203810;
RA Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M.,
RA dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W.,
RA Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D.,
RA Chapple C., Cheng C., Correa L.G., Dacre M., DeBarry J., Dreyer I.,
RA Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K.,
RA Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M.,
RA Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G.,
RA Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y.,
RA Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K.,
RA Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R.,
RA Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B.,
RA Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y.,
RA Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N.,
RA Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N.,
RA Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S.,
RA Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q.,
RA Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J.,
RA Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.;
RT "The Selaginella genome identifies genetic changes associated with the
RT evolution of vascular plants.";
RL Science 332:960-963(2011).
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DR EMBL; GL377578; EFJ29202.1; -; Genomic_DNA.
DR RefSeq; XP_002970078.1; XM_002970032.1.
DR AlphaFoldDB; D8RFX6; -.
DR STRING; 88036.D8RFX6; -.
DR EnsemblPlants; EFJ29202; EFJ29202; SELMODRAFT_171130.
DR GeneID; 9645569; -.
DR Gramene; EFJ29202; EFJ29202; SELMODRAFT_171130.
DR KEGG; smo:SELMODRAFT_171130; -.
DR eggNOG; KOG2185; Eukaryota.
DR HOGENOM; CLU_043217_0_0_1; -.
DR InParanoid; D8RFX6; -.
DR OMA; FRYMDGR; -.
DR OrthoDB; 3060898at2759; -.
DR Proteomes; UP000001514; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 2.30.30.1190; -; 1.
DR InterPro; IPR000467; G_patch_dom.
DR InterPro; IPR041367; Znf-CCCH_4.
DR InterPro; IPR000571; Znf_CCCH.
DR InterPro; IPR036855; Znf_CCCH_sf.
DR PANTHER; PTHR47650; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 22; 1.
DR PANTHER; PTHR47650:SF2; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 22; 1.
DR Pfam; PF01585; G-patch; 1.
DR Pfam; PF18044; zf-CCCH_4; 1.
DR SMART; SM00443; G_patch; 1.
DR SMART; SM00356; ZnF_C3H1; 1.
DR SUPFAM; SSF90229; CCCH zinc finger; 1.
DR PROSITE; PS50174; G_PATCH; 1.
DR PROSITE; PS50103; ZF_C3H1; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000001514};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 137..164
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 286..332
FT /note="G-patch"
FT /evidence="ECO:0000259|PROSITE:PS50174"
FT ZN_FING 137..164
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 238..266
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 327..366
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 384..414
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 13..67
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 238..252
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 351..366
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 399..414
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 483 AA; 53835 MW; 38204BF4262F2189 CRC64;
MGVEEEEESA LLERELEEQL IEHNESLPAL EEALLREPGN QELQSLREDL VAAVKEVEES
LLSLKRRRLL LQIDSSKDLL ACDKDEEQQQ QHQREQHFVA GSKCRFRHTD GRWYNGRVLD
LCQDGTNARV SFLTPTNEKM QICRFFLQQR CRYGESCRSS HGFLVQLSSL KDLPDVRWQE
IEIGSTVLAC TSTDGTGLWR DAEVEKLVDQ LQVVNVVFSD DGSKAIVGKE NLALSEHAAV
TDSSSTSSSS SSDESSDDEE ILPGIGTFSG YQQTETVLFA NWEKHTRGVA SKLMAKMGYK
QGSGLGTSGQ GLVTPLQVRV LPPKTSLDFV SESTPPKPSA KKKSRGGKRK RDRKFAEERR
ASKALEEAEG APDVFSFINV QLSSSSGMDS SAKEKKPAVA ATGKSKDDRR SLVRQQDEIK
ELASKVAKLE EMARRNRKEK SVFEAVTRKL GEARKALGDA EAALQSTAHA VRSKEEEKKW
LRF
//
