ID D8RJ16_SELML Unreviewed; 846 AA.
AC D8RJ16;
DT 05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2010, sequence version 1.
DT 08-NOV-2023, entry version 53.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=SELMODRAFT_94889 {ECO:0000313|EMBL:EFJ27628.1};
OS Selaginella moellendorffii (Spikemoss).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
OX NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514};
RN [1] {ECO:0000313|EMBL:EFJ27628.1, ECO:0000313|Proteomes:UP000001514}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=21551031; DOI=10.1126/science.1203810;
RA Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M.,
RA dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W.,
RA Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D.,
RA Chapple C., Cheng C., Correa L.G., Dacre M., DeBarry J., Dreyer I.,
RA Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K.,
RA Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M.,
RA Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G.,
RA Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y.,
RA Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K.,
RA Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R.,
RA Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B.,
RA Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y.,
RA Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N.,
RA Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N.,
RA Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S.,
RA Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q.,
RA Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J.,
RA Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.;
RT "The Selaginella genome identifies genetic changes associated with the
RT evolution of vascular plants.";
RL Science 332:960-963(2011).
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DR EMBL; GL377581; EFJ27628.1; -; Genomic_DNA.
DR RefSeq; XP_002971030.1; XM_002970984.1.
DR AlphaFoldDB; D8RJ16; -.
DR EnsemblPlants; EFJ27628; EFJ27628; SELMODRAFT_94889.
DR Gramene; EFJ27628; EFJ27628; SELMODRAFT_94889.
DR KEGG; smo:SELMODRAFT_94889; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_15_6_1; -.
DR InParanoid; D8RJ16; -.
DR Proteomes; UP000001514; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 7.
DR PANTHER; PTHR24015:SF2033; DYW_DEAMINASE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR Pfam; PF01535; PPR; 5.
DR Pfam; PF13041; PPR_2; 5.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 8.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001514};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 60..94
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 136..170
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 171..205
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 272..306
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 345..379
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 481..515
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 585..619
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 687..721
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 846 AA; 92269 MW; 04BC5489FB9DE649 CRC64;
MLKLHGDAKN LDAGRAVHLQ MITSGYHRDR YLCNLLIQMY GRCRSVHDAI AVFHTVSRKN
VFTWTILIVA HTHNGLFFEA VELFREMDVH GVQSDEFTFS AILEACSNLG LAFLSLGKTI
HSRIHQQGLK LTSNPTVICS TAMIDAYAQN GHIEQAAEIF ERMQLQGLDP DLIAWTAMMT
AYNQLGHARE ALLLFRKMDL QGLEPDRFAF VAAIDACSSI PSLEQGTVLH SRLLASSVEC
DGVVGNALLN FYAKAGLVHE SRSLFSSMKV KNVVTWSAIV AAYAQNGHHE PAVELFREML
LDGIAPNKVT IALLRIVEAC DQPDALDQAR ELHTRFFPGA AAAGDVVVAT ALVNMYGRCG
SVSDAKTVFD EMQHRNITSW NAMLVTYSLN QRSLEALRFF RTMLLEGEGV KPDAITFVSA
ADACGMMGDL SRAVEIHSRI SQSWPSNQTD VVLGSALIKM YGNCRSLAGA AQVLDEMPRT
NVISWTSMIL ACEQNEDNEA AIHVYRAMQL HGHKPDPVTM VTVIKAAANL HDLKRGIEFH
AQAAAFGFAT STVVGNALVT LYGTSGDLQA AENVFKELLQ QSVEDVVTWN SMLSAWNQNG
LPNQALRTFQ RMLHHGRHPD KTTFVNILNA CAGDPSKLLQ AVKIHALAAA CGLDSDTDVA
NTLLHMYSRC GNLSRARKVF HAITQKNVVS WSAMAAACAH NGDADGALQA FRGMLHGGIQ
PNAVTFISIL SGCSHTGLMD EAVSYLYAMS SDHNLKPTVQ HYACLLDLLA RAGKFHRAEE
LATHLPNPVA WNSLLGACLV HGDAETAARA ADTAAKLQPL DCAPYVSLSN AMSTGKNLKT
KLNYFQ
//