ID D8RLF5_SELML Unreviewed; 485 AA.
AC D8RLF5;
DT 05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2010, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
DE Flags: Fragment;
GN ORFNames=SELMODRAFT_96876 {ECO:0000313|EMBL:EFJ27119.1};
OS Selaginella moellendorffii (Spikemoss).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
OX NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514};
RN [1] {ECO:0000313|EMBL:EFJ27119.1, ECO:0000313|Proteomes:UP000001514}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=21551031; DOI=10.1126/science.1203810;
RA Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M.,
RA dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W.,
RA Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D.,
RA Chapple C., Cheng C., Correa L.G., Dacre M., DeBarry J., Dreyer I.,
RA Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K.,
RA Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M.,
RA Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G.,
RA Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y.,
RA Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K.,
RA Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R.,
RA Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B.,
RA Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y.,
RA Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N.,
RA Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N.,
RA Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S.,
RA Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q.,
RA Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J.,
RA Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.;
RT "The Selaginella genome identifies genetic changes associated with the
RT evolution of vascular plants.";
RL Science 332:960-963(2011).
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DR EMBL; GL377583; EFJ27119.1; -; Genomic_DNA.
DR RefSeq; XP_002972202.1; XM_002972156.1.
DR AlphaFoldDB; D8RLF5; -.
DR EnsemblPlants; EFJ27119; EFJ27119; SELMODRAFT_96876.
DR Gramene; EFJ27119; EFJ27119; SELMODRAFT_96876.
DR KEGG; smo:SELMODRAFT_96876; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_37_1_1; -.
DR InParanoid; D8RLF5; -.
DR Proteomes; UP000001514; Unassembled WGS sequence.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046849; Eplus_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 2.
DR PANTHER; PTHR47924:SF204; DYW_DEAMINASE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47924; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20430; Eplus_motif; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13041; PPR_2; 2.
DR PROSITE; PS51375; PPR; 3.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001514};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 60..92
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 93..127
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 194..228
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 415..484
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:EFJ27119.1"
SQ SEQUENCE 485 AA; 53173 MW; A9DDA796B89E580C CRC64;
ALCSCSGLRD LEQGKSIHDR VAADGFDTQV FVGNALVNMY SKCRRLDLAR AAFERIDSKD
VVSWNSMIAA HSQLGGSDEA LETAVFDRME RRNVVSWSGL IAALAEHGRG RDAIELFHRM
DLDGIQPNEV TLLSVLEACA STGAIAEGRR THARVSGCGF EAETNVANAL VNMYGKCGHL
GSARTVFDAM TWRNVVSWTA MLAGYAHHGH TEEARRVFKA MALEGIQPNV ITFVSVLFNC
SHAGVVSDGL EQFHIMVGDF GIVPVTEHYG CVIDLLGRAG WLEEAEELLR TMPVEPDKAA
WNSLLGACKV HSHTDRAKRI AKLACDLALP FASAPYVLLS NMYTDEEQQS DPEEDQCSSL
IEVKGRVHEF VAGDWSHPRI EEIVAELQRL QEEMMILRGS SLCEEGGQEG SVQENEHSLK
LAIAFGVLAS PQGSTINVVN TRRICVECHD AAKVISKIAG RKIVVRDSYR FHHIEQGVCS
CGDYC
//
