ID D8RLI5_SELML Unreviewed; 1145 AA.
AC D8RLI5;
DT 05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2010, sequence version 1.
DT 27-MAR-2024, entry version 57.
DE RecName: Full=Clu domain-containing protein {ECO:0000259|PROSITE:PS51823};
DE Flags: Fragment;
GN ORFNames=SELMODRAFT_10032 {ECO:0000313|EMBL:EFJ26734.1};
OS Selaginella moellendorffii (Spikemoss).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
OX NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514};
RN [1] {ECO:0000313|EMBL:EFJ26734.1, ECO:0000313|Proteomes:UP000001514}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=21551031; DOI=10.1126/science.1203810;
RA Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M.,
RA dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W.,
RA Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D.,
RA Chapple C., Cheng C., Correa L.G., Dacre M., DeBarry J., Dreyer I.,
RA Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K.,
RA Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M.,
RA Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G.,
RA Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y.,
RA Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K.,
RA Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R.,
RA Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B.,
RA Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y.,
RA Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N.,
RA Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N.,
RA Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S.,
RA Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q.,
RA Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J.,
RA Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.;
RT "The Selaginella genome identifies genetic changes associated with the
RT evolution of vascular plants.";
RL Science 332:960-963(2011).
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DR EMBL; GL377583; EFJ26734.1; -; Genomic_DNA.
DR RefSeq; XP_002971817.1; XM_002971771.1.
DR AlphaFoldDB; D8RLI5; -.
DR STRING; 88036.D8RLI5; -.
DR EnsemblPlants; EFJ26734; EFJ26734; SELMODRAFT_10032.
DR Gramene; EFJ26734; EFJ26734; SELMODRAFT_10032.
DR KEGG; smo:SELMODRAFT_10032; -.
DR eggNOG; KOG1839; Eukaryota.
DR HOGENOM; CLU_001902_1_0_1; -.
DR InParanoid; D8RLI5; -.
DR OMA; TWIEAFI; -.
DR Proteomes; UP000001514; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0051640; P:organelle localization; IEA:UniProt.
DR GO; GO:0006996; P:organelle organization; IEA:InterPro.
DR CDD; cd15466; CLU-central; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR033646; CLU-central.
DR InterPro; IPR025697; CLU_dom.
DR InterPro; IPR028275; CLU_N.
DR InterPro; IPR027523; CLU_prot.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR12601; EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3; 1.
DR PANTHER; PTHR12601:SF17; PROTEIN REDUCED CHLOROPLAST COVERAGE 1; 1.
DR Pfam; PF15044; CLU_N; 1.
DR Pfam; PF12807; eIF3_p135; 1.
DR Pfam; PF13424; TPR_12; 2.
DR SMART; SM00028; TPR; 3.
DR SUPFAM; SSF48452; TPR-like; 2.
DR PROSITE; PS51823; CLU; 1.
DR PROSITE; PS50005; TPR; 1.
PE 4: Predicted;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Reference proteome {ECO:0000313|Proteomes:UP000001514};
KW TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT DOMAIN 316..582
FT /note="Clu"
FT /evidence="ECO:0000259|PROSITE:PS51823"
FT REPEAT 912..945
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REGION 1..23
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 128..158
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 307..333
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 574..638
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 582..619
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1145
FT /evidence="ECO:0000313|EMBL:EFJ26734.1"
SQ SEQUENCE 1145 AA; 126477 MW; B569DB8273B4A7EA CRC64;
MAPRAGRAKV HKPKGEKKKK EEKTLPVMLD VTVHLPSGTQ ITLKGISTDR ILDVRRLLAV
NVETCHLTNF SLAHEIKGGR LRDSLEIAVL KPCVLTLVEE DYTEEKAITH VRRLLDIVSS
TACFGPSGKQ LTDTHDGSHK ENSPSTEDSA KLGTSKSKGK SEAAAVIAEA KEASEKGDID
KLCPPSKLGQ FYQFFSFSHL TAPIQCKNLL LKFCCFDLRP ATFILQVRLC NGKLVTAVAC
TSGFYNAGKP QTKFYQLVNL LRHASKAFAN AYDDLIKAFV ERNKFGNIPY GLRSNTWVVP
PTAAEAPSTF PPLPSEDETW GGNGGGQGRD DESVEKEWSR DFMVLARMPC KTDEERQVRD
RKAFLLHSLF VDTCLVHATS VLKDAEQLPD VPLIDDRGHF LVKEAGSLNV LLAQDVTDAS
KKVDFKIDTI HSRQLTPEEL SQKNLFKGIA ADESTTVHDT ATLGVVLIRH KKYMALVEAR
GLKEAQGMIN LPNDLQVEEQ AEGGANALNV NSLRSLLHQT ASVSVDPEEV RKSRDVLQRI
MAESLKGLQN ESDRTDGFIR WELGACWVQH LQTQANSEKA DAKGSNKQDP KKKTNEKLVD
KKTVLEKTKP LDSLRDHVSD SQESSSASLE KPKEVDPLKV QSEAHLKSLL GDAAFTRLKE
SDIGLHSKTV PELVAGADQY YNDVALPKLV SDFASLELSP VDGRTLTDFM HTRGLRMRSL
GRVAELSKKL PHIQSLCVHE MVVRAFKHVL RAMVAAVTHP SELAVSIAVA LNAMLGTPSK
ESMLVSSNTS ELLTWKWLEA FTLKRFGWTL SVDPRPELRK YAVLRGICHK VGVEIAPRDY
DYQSPNPFSS ADIISMVPVY KQAACSSADG RTLLESSKTA LDKGKLDDAV AYGTKALAKL
VAVCGSYHRM TAGAYSLLAV VLYHTGDFNQ ATIYQQKALD INERELGLDH PDTMKSYGDL
AVFYYRLQHT ELALKYVNRA LYLLHLICGP SHPNTAATYI NVAMMEEGLG NVHIALRYLH
EALKCNQRLL GADHIQTAAS YHAIAIALSL MEAYSLSVQH EQTTLQILQA KLGPDDLRTQ
DAAAWLDYFD SKAVEQQEAA RTGAPKPDAS IASKGHLSVS DLLEYINAEA ELKRKELENI
KRKPK
//
