ID D8S2F3_SELML Unreviewed; 805 AA.
AC D8S2F3;
DT 05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2010, sequence version 1.
DT 08-NOV-2023, entry version 49.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN ORFNames=SELMODRAFT_106776 {ECO:0000313|EMBL:EFJ21621.1};
OS Selaginella moellendorffii (Spikemoss).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
OX NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514};
RN [1] {ECO:0000313|EMBL:EFJ21621.1, ECO:0000313|Proteomes:UP000001514}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=21551031; DOI=10.1126/science.1203810;
RA Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M.,
RA dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W.,
RA Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D.,
RA Chapple C., Cheng C., Correa L.G., Dacre M., DeBarry J., Dreyer I.,
RA Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K.,
RA Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M.,
RA Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G.,
RA Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y.,
RA Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K.,
RA Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R.,
RA Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B.,
RA Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y.,
RA Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N.,
RA Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N.,
RA Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S.,
RA Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q.,
RA Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J.,
RA Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.;
RT "The Selaginella genome identifies genetic changes associated with the
RT evolution of vascular plants.";
RL Science 332:960-963(2011).
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DR EMBL; GL377599; EFJ21621.1; -; Genomic_DNA.
DR RefSeq; XP_002977617.1; XM_002977571.1.
DR AlphaFoldDB; D8S2F3; -.
DR EnsemblPlants; EFJ21621; EFJ21621; SELMODRAFT_106776.
DR GeneID; 9656154; -.
DR Gramene; EFJ21621; EFJ21621; SELMODRAFT_106776.
DR KEGG; smo:SELMODRAFT_106776; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_37_8_1; -.
DR InParanoid; D8S2F3; -.
DR OrthoDB; 451316at2759; -.
DR Proteomes; UP000001514; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR046849; Eplus_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR046960; PPR_At4g14850-like_plant.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF20430; Eplus_motif; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF13041; PPR_2; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 4.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001514};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 92..126
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 194..228
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 266..300
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 498..532
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 713..805
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 805 AA; 88083 MW; 0FFF4FB5B91883BA CRC64;
MRSSQLVGLE QQQQFWIQQQ QQDLSSFDSA AAVRLVRECN SIARGKLLHS KISSSPSLSR
DGYLASSLVY MYLRCGSLES AIDVFHKIAH KSIVLWTVLI SAYVSRGHSA AAIALFHRIL
QEGIALDAIV FVSVLSACSS EEFLAAGRLI HRCAVEAGLG LQEIVASALV SMYGRCGSLR
DANALFGHLE RHLDVVLWNA MITANSQNGS PREALEIFYR MLQLGIPPDL VTFVSVFKAC
SSSPSLRASQ VKGFHACLDE TGLGSDVVVA TALVNAYARC GEIDCARKFF AEMPERNAVS
WTSMIAAFTQ IGHLLAVETF HAMLLEGVVP TRSTLFAALE GCEDLRVARL VEAIAQEIGV
VTDVAIVTDL VMAYARCDGQ EDAIRVFSAR EEGEWDAALV TAMIAVYAQC RDRRSTFKLW
GAAIERGISP DRILYITALD ACASLAALSE GRQIHACVAA DRRLDRDVTL GNAIVSMYGQ
CGSLRDARDA FDGMPARDEI SWNAMLSASA QHGRVEDCCD LFRAMLQEGF DAERIAFLNL
LSACAHAGLV KAGCEHFSAM TGDHGVVPAT EHYGCMVDLL GRKGRLADAH GIVQAMPVPP
DAATWMALMG ACRIYGDTER GRFAAERVLE LRADHTAAYV ALCNIYSAAG RWDDAAAVRK
IMADLGLRKI PGVSSIEIRS KVHEFVVRDR SHPQSEAIYA ELERVMGAIE RAGYRAVTGE
VLHDVEEEQK EQLLRFHSEK LAIAFGMMST PQGSTLRVIK NLRVCVDCHN ASKFISKVFG
REIVVRDVRR FHHFKDGACS CGDYW
//