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Database: UniProt
Entry: D8S2F3_SELML
LinkDB: D8S2F3_SELML
Original site: D8S2F3_SELML 
ID   D8S2F3_SELML            Unreviewed;       805 AA.
AC   D8S2F3;
DT   05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT   05-OCT-2010, sequence version 1.
DT   08-NOV-2023, entry version 49.
DE   RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN   ORFNames=SELMODRAFT_106776 {ECO:0000313|EMBL:EFJ21621.1};
OS   Selaginella moellendorffii (Spikemoss).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
OX   NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514};
RN   [1] {ECO:0000313|EMBL:EFJ21621.1, ECO:0000313|Proteomes:UP000001514}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=21551031; DOI=10.1126/science.1203810;
RA   Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M.,
RA   dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W.,
RA   Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D.,
RA   Chapple C., Cheng C., Correa L.G., Dacre M., DeBarry J., Dreyer I.,
RA   Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K.,
RA   Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M.,
RA   Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G.,
RA   Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y.,
RA   Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K.,
RA   Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R.,
RA   Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B.,
RA   Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y.,
RA   Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N.,
RA   Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N.,
RA   Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S.,
RA   Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q.,
RA   Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J.,
RA   Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.;
RT   "The Selaginella genome identifies genetic changes associated with the
RT   evolution of vascular plants.";
RL   Science 332:960-963(2011).
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DR   EMBL; GL377599; EFJ21621.1; -; Genomic_DNA.
DR   RefSeq; XP_002977617.1; XM_002977571.1.
DR   AlphaFoldDB; D8S2F3; -.
DR   EnsemblPlants; EFJ21621; EFJ21621; SELMODRAFT_106776.
DR   GeneID; 9656154; -.
DR   Gramene; EFJ21621; EFJ21621; SELMODRAFT_106776.
DR   KEGG; smo:SELMODRAFT_106776; -.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_37_8_1; -.
DR   InParanoid; D8S2F3; -.
DR   OrthoDB; 451316at2759; -.
DR   Proteomes; UP000001514; Unassembled WGS sequence.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR   InterPro; IPR032867; DYW_dom.
DR   InterPro; IPR046848; E_motif.
DR   InterPro; IPR046849; Eplus_motif.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR046960; PPR_At4g14850-like_plant.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 4.
DR   PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR   Pfam; PF14432; DYW_deaminase; 1.
DR   Pfam; PF20431; E_motif; 1.
DR   Pfam; PF20430; Eplus_motif; 1.
DR   Pfam; PF01535; PPR; 4.
DR   Pfam; PF13041; PPR_2; 1.
DR   SUPFAM; SSF48452; TPR-like; 1.
DR   PROSITE; PS51375; PPR; 4.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000001514};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REPEAT          92..126
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          194..228
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          266..300
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          498..532
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   DOMAIN          713..805
FT                   /note="DYW"
FT                   /evidence="ECO:0000259|Pfam:PF14432"
SQ   SEQUENCE   805 AA;  88083 MW;  0FFF4FB5B91883BA CRC64;
     MRSSQLVGLE QQQQFWIQQQ QQDLSSFDSA AAVRLVRECN SIARGKLLHS KISSSPSLSR
     DGYLASSLVY MYLRCGSLES AIDVFHKIAH KSIVLWTVLI SAYVSRGHSA AAIALFHRIL
     QEGIALDAIV FVSVLSACSS EEFLAAGRLI HRCAVEAGLG LQEIVASALV SMYGRCGSLR
     DANALFGHLE RHLDVVLWNA MITANSQNGS PREALEIFYR MLQLGIPPDL VTFVSVFKAC
     SSSPSLRASQ VKGFHACLDE TGLGSDVVVA TALVNAYARC GEIDCARKFF AEMPERNAVS
     WTSMIAAFTQ IGHLLAVETF HAMLLEGVVP TRSTLFAALE GCEDLRVARL VEAIAQEIGV
     VTDVAIVTDL VMAYARCDGQ EDAIRVFSAR EEGEWDAALV TAMIAVYAQC RDRRSTFKLW
     GAAIERGISP DRILYITALD ACASLAALSE GRQIHACVAA DRRLDRDVTL GNAIVSMYGQ
     CGSLRDARDA FDGMPARDEI SWNAMLSASA QHGRVEDCCD LFRAMLQEGF DAERIAFLNL
     LSACAHAGLV KAGCEHFSAM TGDHGVVPAT EHYGCMVDLL GRKGRLADAH GIVQAMPVPP
     DAATWMALMG ACRIYGDTER GRFAAERVLE LRADHTAAYV ALCNIYSAAG RWDDAAAVRK
     IMADLGLRKI PGVSSIEIRS KVHEFVVRDR SHPQSEAIYA ELERVMGAIE RAGYRAVTGE
     VLHDVEEEQK EQLLRFHSEK LAIAFGMMST PQGSTLRVIK NLRVCVDCHN ASKFISKVFG
     REIVVRDVRR FHHFKDGACS CGDYW
//
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