ID D8S5F3_SELML Unreviewed; 899 AA.
AC D8S5F3;
DT 05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2010, sequence version 1.
DT 24-JAN-2024, entry version 54.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN ORFNames=SELMODRAFT_108616 {ECO:0000313|EMBL:EFJ20442.1};
OS Selaginella moellendorffii (Spikemoss).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
OX NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514};
RN [1] {ECO:0000313|EMBL:EFJ20442.1, ECO:0000313|Proteomes:UP000001514}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=21551031; DOI=10.1126/science.1203810;
RA Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M.,
RA dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W.,
RA Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D.,
RA Chapple C., Cheng C., Correa L.G., Dacre M., DeBarry J., Dreyer I.,
RA Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K.,
RA Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M.,
RA Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G.,
RA Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y.,
RA Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K.,
RA Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R.,
RA Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B.,
RA Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y.,
RA Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N.,
RA Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N.,
RA Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S.,
RA Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q.,
RA Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J.,
RA Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.;
RT "The Selaginella genome identifies genetic changes associated with the
RT evolution of vascular plants.";
RL Science 332:960-963(2011).
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DR EMBL; GL377602; EFJ20442.1; -; Genomic_DNA.
DR RefSeq; XP_002978456.1; XM_002978410.1.
DR AlphaFoldDB; D8S5F3; -.
DR EnsemblPlants; EFJ20442; EFJ20442; SELMODRAFT_108616.
DR Gramene; EFJ20442; EFJ20442; SELMODRAFT_108616.
DR KEGG; smo:SELMODRAFT_108616; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_15_1_1; -.
DR InParanoid; D8S5F3; -.
DR OMA; EIHTHIR; -.
DR Proteomes; UP000001514; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 5.
DR PANTHER; PTHR24015:SF2033; DYW_DEAMINASE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF13041; PPR_2; 5.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 6.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001514};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 91..125
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 191..225
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 262..296
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 393..427
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 493..527
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 596..630
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 823..898
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 899 AA; 99016 MW; 8E4094267CE3D84E CRC64;
MNPAATELSL QTHINQLKKS SESLQPARYA SLLQKCTEQK SAAAGKLVHQ HILSSGCGVN
RYIQNHLIFM YAKCGCLEDA LEVFELLPNP NVFSWTALIT AYAKEGHLRE VLGLFRKMQL
DGTKPDAFVF STVLTACSSA GALNEGKAIH DCAVLAGMET QVVGNAIVNL YGKCGRVHEA
KAVFERLPER NLVSWNALIA ANAQNGHCKD AMQVFHLMDL DGSVRPNDAT FVSVVDACSN
LLDLPRGKST HERIIRTGFD SYLFVGNSLV NMYGKCGSVD RARLVFEKMS SRNVVSWTVM
IWAYAQQGFI RAAFDLYKRM DCEPNAVTFM AVMDSCLRPE DLPRAEQIHA HMVASGFDSD
AVLQVCLVTM YGKCGSVDSA WSIFENLKER SNNAVTWNAM ISGLAQHGES KQALECFWKM
ELEGVRPNSV TYLASLEACS SLNDLTRGRQ LHARILLENI HEANLSNAVI NMYGKCGSLD
EAMDEFAKMP ERDVVSWNTM IATYAQHGSG RQALEFFKQM DLEGWTTDRA TYLGAIDACG
SVPSLALGKT IHSIVATAAP CLEQDPGVAT ALVTMYARCG SLHDAKSVFW RSHSRNLVTW
SNLIAACAQH GRENEALDLF REMQLQGTKP DALTFSTLVA ACSRRGVVKD GVFYFVSMVE
DYSIPASEDH FGGMVDLLGR AGWLEEAEQV MRKNPCALAH AVLLGACHVH GDVERGIRIA
QSALELDWKN SASFAASMAM LAELYGAAGR WEDAARVRKA VESRNARREP GGRSWIEVKN
RVHEFGEDDD RLQGPRLDKI RGELQRLSSL AVEEGGICKD ENARAHILGC CHSEKVAIGF
GIVSTPAGQL IRIVKNLRAC HDCHAFAKFV SRRIQREISV RDPYGLHCFQ TNGSCSCEI
//