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Database: UniProt
Entry: D8S5F3_SELML
LinkDB: D8S5F3_SELML
Original site: D8S5F3_SELML 
ID   D8S5F3_SELML            Unreviewed;       899 AA.
AC   D8S5F3;
DT   05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT   05-OCT-2010, sequence version 1.
DT   24-JAN-2024, entry version 54.
DE   RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN   ORFNames=SELMODRAFT_108616 {ECO:0000313|EMBL:EFJ20442.1};
OS   Selaginella moellendorffii (Spikemoss).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
OX   NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514};
RN   [1] {ECO:0000313|EMBL:EFJ20442.1, ECO:0000313|Proteomes:UP000001514}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=21551031; DOI=10.1126/science.1203810;
RA   Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M.,
RA   dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W.,
RA   Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D.,
RA   Chapple C., Cheng C., Correa L.G., Dacre M., DeBarry J., Dreyer I.,
RA   Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K.,
RA   Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M.,
RA   Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G.,
RA   Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y.,
RA   Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K.,
RA   Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R.,
RA   Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B.,
RA   Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y.,
RA   Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N.,
RA   Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N.,
RA   Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S.,
RA   Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q.,
RA   Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J.,
RA   Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.;
RT   "The Selaginella genome identifies genetic changes associated with the
RT   evolution of vascular plants.";
RL   Science 332:960-963(2011).
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DR   EMBL; GL377602; EFJ20442.1; -; Genomic_DNA.
DR   RefSeq; XP_002978456.1; XM_002978410.1.
DR   AlphaFoldDB; D8S5F3; -.
DR   EnsemblPlants; EFJ20442; EFJ20442; SELMODRAFT_108616.
DR   Gramene; EFJ20442; EFJ20442; SELMODRAFT_108616.
DR   KEGG; smo:SELMODRAFT_108616; -.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_15_1_1; -.
DR   InParanoid; D8S5F3; -.
DR   OMA; EIHTHIR; -.
DR   Proteomes; UP000001514; Unassembled WGS sequence.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR   InterPro; IPR032867; DYW_dom.
DR   InterPro; IPR046848; E_motif.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR045215; PPR_prot_At1g15510.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 5.
DR   PANTHER; PTHR24015:SF2033; DYW_DEAMINASE DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR   Pfam; PF14432; DYW_deaminase; 1.
DR   Pfam; PF20431; E_motif; 1.
DR   Pfam; PF01535; PPR; 4.
DR   Pfam; PF13041; PPR_2; 5.
DR   SUPFAM; SSF48452; TPR-like; 1.
DR   PROSITE; PS51375; PPR; 6.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000001514};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REPEAT          91..125
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          191..225
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          262..296
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          393..427
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          493..527
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          596..630
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   DOMAIN          823..898
FT                   /note="DYW"
FT                   /evidence="ECO:0000259|Pfam:PF14432"
SQ   SEQUENCE   899 AA;  99016 MW;  8E4094267CE3D84E CRC64;
     MNPAATELSL QTHINQLKKS SESLQPARYA SLLQKCTEQK SAAAGKLVHQ HILSSGCGVN
     RYIQNHLIFM YAKCGCLEDA LEVFELLPNP NVFSWTALIT AYAKEGHLRE VLGLFRKMQL
     DGTKPDAFVF STVLTACSSA GALNEGKAIH DCAVLAGMET QVVGNAIVNL YGKCGRVHEA
     KAVFERLPER NLVSWNALIA ANAQNGHCKD AMQVFHLMDL DGSVRPNDAT FVSVVDACSN
     LLDLPRGKST HERIIRTGFD SYLFVGNSLV NMYGKCGSVD RARLVFEKMS SRNVVSWTVM
     IWAYAQQGFI RAAFDLYKRM DCEPNAVTFM AVMDSCLRPE DLPRAEQIHA HMVASGFDSD
     AVLQVCLVTM YGKCGSVDSA WSIFENLKER SNNAVTWNAM ISGLAQHGES KQALECFWKM
     ELEGVRPNSV TYLASLEACS SLNDLTRGRQ LHARILLENI HEANLSNAVI NMYGKCGSLD
     EAMDEFAKMP ERDVVSWNTM IATYAQHGSG RQALEFFKQM DLEGWTTDRA TYLGAIDACG
     SVPSLALGKT IHSIVATAAP CLEQDPGVAT ALVTMYARCG SLHDAKSVFW RSHSRNLVTW
     SNLIAACAQH GRENEALDLF REMQLQGTKP DALTFSTLVA ACSRRGVVKD GVFYFVSMVE
     DYSIPASEDH FGGMVDLLGR AGWLEEAEQV MRKNPCALAH AVLLGACHVH GDVERGIRIA
     QSALELDWKN SASFAASMAM LAELYGAAGR WEDAARVRKA VESRNARREP GGRSWIEVKN
     RVHEFGEDDD RLQGPRLDKI RGELQRLSSL AVEEGGICKD ENARAHILGC CHSEKVAIGF
     GIVSTPAGQL IRIVKNLRAC HDCHAFAKFV SRRIQREISV RDPYGLHCFQ TNGSCSCEI
//
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