GenomeNet

Database: UniProt
Entry: D8SKW7_SELML
LinkDB: D8SKW7_SELML
Original site: D8SKW7_SELML 
ID   D8SKW7_SELML            Unreviewed;       246 AA.
AC   D8SKW7;
DT   05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT   05-OCT-2010, sequence version 1.
DT   24-JAN-2024, entry version 53.
DE   RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
DE   Flags: Fragment;
GN   ORFNames=SELMODRAFT_119240 {ECO:0000313|EMBL:EFJ14924.1};
OS   Selaginella moellendorffii (Spikemoss).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
OX   NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514};
RN   [1] {ECO:0000313|EMBL:EFJ14924.1, ECO:0000313|Proteomes:UP000001514}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=21551031; DOI=10.1126/science.1203810;
RA   Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M.,
RA   dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W.,
RA   Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D.,
RA   Chapple C., Cheng C., Correa L.G., Dacre M., DeBarry J., Dreyer I.,
RA   Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K.,
RA   Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M.,
RA   Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G.,
RA   Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y.,
RA   Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K.,
RA   Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R.,
RA   Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B.,
RA   Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y.,
RA   Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N.,
RA   Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N.,
RA   Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S.,
RA   Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q.,
RA   Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J.,
RA   Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.;
RT   "The Selaginella genome identifies genetic changes associated with the
RT   evolution of vascular plants.";
RL   Science 332:960-963(2011).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; GL377625; EFJ14924.1; -; Genomic_DNA.
DR   RefSeq; XP_002983912.1; XM_002983866.1.
DR   AlphaFoldDB; D8SKW7; -.
DR   STRING; 88036.D8SKW7; -.
DR   EnsemblPlants; EFJ14924; EFJ14924; SELMODRAFT_119240.
DR   Gramene; EFJ14924; EFJ14924; SELMODRAFT_119240.
DR   KEGG; smo:SELMODRAFT_119240; -.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_5_0_1; -.
DR   InParanoid; D8SKW7; -.
DR   Proteomes; UP000001514; Unassembled WGS sequence.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR046960; PPR_At4g14850-like_plant.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 5.
DR   PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR   Pfam; PF01535; PPR; 6.
DR   PROSITE; PS51375; PPR; 4.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000001514};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REPEAT          5..39
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          67..101
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          129..163
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          191..225
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   NON_TER         246
FT                   /evidence="ECO:0000313|EMBL:EFJ14924.1"
SQ   SEQUENCE   246 AA;  27281 MW;  E1AA40B71BB2C122 CRC64;
     MPRRDLVSWT AIVSSYAQVG STQQAHCLFD SMPARNVVAW NAIVSAFARE RHLQILKNLF
     DWMPERSIVS WTALIAGFSQ AGSLRESIAI FDRMPTRDLV AHNAIVAALA LHGHAADAIT
     LFDRIPQRDV VTWTAALQGL AQEGRIDESR SLFDRMPSRN LVSWNALLPA YAIAGQLGEA
     EKLFNSMPQW DSHAWNSMIQ GYGVNGFPEK AKTLFASMAQ PDVATWTNVL AAFAARGDLN
     EAEFFF
//
DBGET integrated database retrieval system