ID D8SZL0_SELML Unreviewed; 796 AA.
AC D8SZL0;
DT 05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2010, sequence version 1.
DT 27-MAR-2024, entry version 52.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN ORFNames=SELMODRAFT_128847 {ECO:0000313|EMBL:EFJ10041.1};
OS Selaginella moellendorffii (Spikemoss).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
OX NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514};
RN [1] {ECO:0000313|EMBL:EFJ10041.1, ECO:0000313|Proteomes:UP000001514}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=21551031; DOI=10.1126/science.1203810;
RA Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M.,
RA dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W.,
RA Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D.,
RA Chapple C., Cheng C., Correa L.G., Dacre M., DeBarry J., Dreyer I.,
RA Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K.,
RA Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M.,
RA Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G.,
RA Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y.,
RA Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K.,
RA Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R.,
RA Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B.,
RA Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y.,
RA Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N.,
RA Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N.,
RA Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S.,
RA Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q.,
RA Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J.,
RA Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.;
RT "The Selaginella genome identifies genetic changes associated with the
RT evolution of vascular plants.";
RL Science 332:960-963(2011).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; GL377656; EFJ10041.1; -; Genomic_DNA.
DR RefSeq; XP_002988779.1; XM_002988733.1.
DR AlphaFoldDB; D8SZL0; -.
DR EnsemblPlants; EFJ10041; EFJ10041; SELMODRAFT_128847.
DR GeneID; 9661402; -.
DR Gramene; EFJ10041; EFJ10041; SELMODRAFT_128847.
DR KEGG; smo:SELMODRAFT_128847; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_15_1_1; -.
DR InParanoid; D8SZL0; -.
DR OrthoDB; 364303at2759; -.
DR Proteomes; UP000001514; Unassembled WGS sequence.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 6.
DR PANTHER; PTHR47928:SF190; OS04G0110500 PROTEIN; 1.
DR PANTHER; PTHR47928; REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 6.
DR Pfam; PF13041; PPR_2; 3.
DR PROSITE; PS51375; PPR; 7.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001514};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 88..118
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 156..186
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 188..218
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 286..320
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 387..421
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 458..488
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 489..523
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 704..796
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 796 AA; 88163 MW; 27B08C7C665B88B7 CRC64;
MKRSLAPAKV RRFQLKEEKA GSRFDSSGHY RDALRQCQDL ESVRQIHDRI SGAASANVFL
GNEIVRAYGK CGSVASARVA FDAIARKNDY SWGSMLTAYA QNGHYRAALD LYKRMDLQPN
PVVYTTVLGA CASIEALEEG KAIHSRISGT KGLKLDVILE NSLLTMYAKC GSLEDAKRLF
ERMSGRRSVS SWNAMIAAYA QSGHFEEAIR LYEDMDVEPS VRTFTSVLSA CSNLGLLDQG
RKIHALISSR GTELDLSLQN ALLTMYARCK CLDDAAKIFQ RLPRRDVVSW SAMIAAFAET
DLFDEAIEFY SKMQLEGVRP NYYTFASVLL ACASVGDLRA GRAVHDQILG NGYKITLVNG
TALVDLYTSY GSLDEARSLF DQIENRDEGL WTVLIGGYSK QGHRTGVLEL YREMKNTTKV
PATKIIYSCV ISACASLGAF ADARQAHSDI EADGMISDFV LATSLVNMYS RWGNLESARQ
VFDKMSSRDT LAWTTLIAGY AKHGEHGLAL GLYKEMELEG AEPSELTFMV VLYACSHAGL
QEQGKQLFIS IQSDYAMHPN IAHYSCIIDL LSRAGRLSDA EELINAMPVE PNDVTWSSLL
GASRIHKDVK RATHAAGQIT KLDPVDPASY VLLSNVHAVT GNLAGMASVR NTMVARGVKK
RRGSSWIEVA DQIHEFNVGD NSHPRFQEIF AELQRLSPKI KEAGYVPESE EVLHDVGEKE
KELLLRLHSE KLAIAFGLIA TAPGTTLRIF NTLRICHDCH SAVKFISAIA RREIIVRDSS
RFHKFRDGQC SCGDYW
//
